DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and ddx42

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001032894.2 Gene:ddx42 / 503932 ZFINID:ZDB-GENE-050706-53 Length:908 Species:Danio rerio


Alignment Length:816 Identity:239/816 - (29%)
Similarity:364/816 - (44%) Gaps:144/816 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NNAADAESQGQGQGQGQGFDSRSGNPRQETRDPQQSRGG-GGEYRRGGGGGGRGFNRQ-SGDYGY 120
            |....:..:|.|.|   ||...:|. ::|...||::... ||.    |..||.|.|:| |..|..
Zfish     4 NKGGPSGKRGFGFG---GFALATGK-KEEPHLPQKAHSSFGGT----GPSGGYGKNQQLSSFYKI 60

  Fly   121 GSGGGGRRGGGGRFEDN---------YNGGEFDSRRGGDWNRSGGGGGGGRGFGRGPSYRGGGGG 176
            |:...........|||:         |...|....|  ...:||||              |||||
Zfish    61 GTKRANFDEENAYFEDDEEESTADLPYIPAENSPTR--KQFQSGGG--------------GGGGG 109

  Fly   177 SGS----------NLNEQTAEDGQAQQQQQP--------RNDRWQEPERPAGFDGSEGGQSAGGN 223
            |.|          .:.:|.|:|.:..::::.        |:|..:|.::.|.|.......:||  
Zfish   110 SDSEDDPLDAFMAEVEDQAAKDMKKLEEKEKEKKMAKGIRDDIEEEDDQEAYFRYMAENPTAG-- 172

  Fly   224 RSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVELFGVGNTGINFDKYE--------- 279
              .....|.....|:|          |...:....:::.:.|..:.::.|::..:|         
Zfish   173 --LTQEEEEEEVDYDS----------DGNPIAPTTKKIIMPLPPIDHSEIDYSPFEKNFYNEHEE 225

  Fly   280 --------------DIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIII 330
                          .:.::.:|...|...|||......|.:.:.:..:.|.:|||:|...:||.:
Zfish   226 ISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIAL 290

  Fly   331 NGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIF 395
            :|||.:..|:|||||||||:.|||..:.:...:.|.:.          |:.:::.|||||..||.
Zfish   291 SGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEG----------PIAVIVCPTRELCQQIH 345

  Fly   396 EEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDE 460
            .|.|:|.....:|...:|||.:..||.:.|..|..::|.|||||.|.:.:....|:.:.|||.||
Zfish   346 AECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVFDE 410

  Fly   461 ADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSE 525
            ||||.|||||.|:|.|...:.    ..||||:|||||.|:|::||.|.|.:.|.:..|.:|..:|
Zfish   411 ADRMFDMGFEYQVRSIASHVR----PDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANE 471

  Fly   526 NITQTILWVYE--PDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTS 588
            :||| |:.|.:  .||..:|...|      .|:|.....|:||..|...:.|...|.|..:.:..
Zfish   472 DITQ-IVEVLQSGQDKWGWLTRRL------VEFTSAGSVLVFVTKKANCEELATNLIQEGYSLGL 529

  Fly   589 IHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRM 653
            :|||..|.||.:.:..|:..:.|:||||.|||||||||.::.|:|:|:..|::.:.||||||||.
Zfish   530 LHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRA 594

  Fly   654 GNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFMEDMSSDRGHGGAKRAGRGGGGRY----GG 714
            |..|||.:....|:.:...||:..|....|.:...:.|::. :.....|...:||.|:.    ||
Zfish   595 GEKGVAYTLLTTKDTSFAGDLVRNLEGANQSVSKDLLDLAM-QNPWFRKSRFKGGKGKKINIGGG 658

  Fly   715 GFGSRDYRQSSGGGGGGRSGPPPRSGGSGSGGGGGSYRSNGNSYGKFGGNSGG---------GGY 770
            |.|   ||:..|.|    |....||||| .....|:|.:...|.|..|.....         ..:
Zfish   659 GLG---YRERPGLG----SECSERSGGS-IAAALGNYETFKPSTGAMGDRMSALKQAFQAQYKNH 715

  Fly   771 YGGGAG---------GGSYGGSYGGGSASHSSNAPD 797
            :...:|         ..|.|.:..|..:|..:.||:
Zfish   716 FVAASGVPPKLTTKSSSSSGWTSAGSLSSLPTGAPE 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 92/269 (34%)
SF2_C_DEAD 527..663 CDD:350174 55/137 (40%)
ddx42NP_001032894.2 SrmB 255..608 CDD:440279 146/373 (39%)

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