DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and Rs1

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster


Alignment Length:684 Identity:188/684 - (27%)
Similarity:289/684 - (42%) Gaps:162/684 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GSGSNLN-----------EQTAEDGQAQQQQQP---RNDRWQEPERPAGFDGSEGGQSAGGNRSY 226
            |:..||:           |..:||..|:.:.||   |:.:..|.|:        |.:.....:.|
  Fly     2 GATKNLDLIGTIEDDAEVENLSEDSDAEVEYQPTKLRHKKVTEFEK--------GFEFVSSVKEY 58

  Fly   227 NN------------------------RGERGGGGYNSRWKEGGGSNVDYT--------------- 252
            |.                        |.::.||......::..||.:|.:               
  Fly    59 NQDTWDDLMKYVKRKARTKTDDKIAARLQKRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKK 123

  Fly   253 -------KLGARDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNV 310
                   |.|..||..|.|.....:|           |||..|     ||||..:.|:..:...:
  Fly   124 ESKKKKKKAGEEDEEDEGEKMQFADT-----------VEANEQ-----ITSFYQMNLSRPLMRAI 172

  Fly   311 ALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQ-MYELGHVPPPQSTRQYSR 374
            .:..|..|||:|...||:.:.|||:..||.||:|||||:::|.|.: :|.      |.:.:..:|
  Fly   173 GVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYR------PLNNKAITR 231

  Fly   375 RKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRL 439
                  .|||.|||||..|:::..|:....:.:...:..||.:...|...|.:...:::||||||
  Fly   232 ------VLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRL 290

  Fly   440 EDMI-TRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQE 503
            .|.| ......|::|..|:|||||||||..|..|::.|:...    ...|||::||||..:|:::
  Fly   291 IDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSC----CKTRQTMLFSATMSEQVKD 351

  Fly   504 LASDFLSNYIFLAVGRVGSTSENITQTILWVYEP---DKRSYLLDLLSSIRDGPEYTKDSLTLIF 565
            ||:..|...|.:.|......:.|:.|..:.:.|.   |:...|..|:..       |.....::|
  Fly   352 LAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLICR-------TFHDHCMVF 409

  Fly   566 VETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKH 630
            |:|||.|..|...|.........:||:.||::|.|:|:.|:.....:|:||.||||||||..||.
  Fly   410 VQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKT 474

  Fly   631 VINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLE------------------- 676
            ||||.:|...|.|:||:|||.|.|..|::.|...||.|.|..|:::                   
  Fly   475 VINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKY 539

  Fly   677 --LLIETKQEIPSFMEDMSSDR---------GHGGAKRAGRGGGGRYGGGFGSRDYRQ------- 723
              .|...:.||.:.:::..::|         .....|..|:....|  |.|.::..|:       
  Fly   540 RNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNERR--GWFQTKQQREAEKDRLA 602

  Fly   724 --------SSGGGGGGRSG---PPPRSGGSGSGG 746
                    :|||.|.|::.   ..|..||.|..|
  Fly   603 LTTGDEDKASGGKGKGKTAGKRKRPEYGGDGEDG 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 83/248 (33%)
SF2_C_DEAD 527..663 CDD:350174 51/138 (37%)
Rs1NP_651970.1 SrmB 156..576 CDD:440279 140/442 (32%)

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