DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and CG7878

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:760 Identity:244/760 - (32%)
Similarity:357/760 - (46%) Gaps:204/760 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RSGNPRQETRDPQQSRGGGGEYRRGGGGGGRGFNRQSGDYGYGSGGGGRRGGGGRFEDNYNGGEF 143
            |.||.|       ..:|...:|    ||.|||:..:..||     |||||..    .|||..|..
  Fly    34 RDGNSR-------AYKGDRNDY----GGEGRGYRAKRNDY-----GGGRRDN----RDNYGAGHR 78

  Fly   144 DSRRGGDWNRSGGGGGG-------------GRGFGRGPSYRGGGGGSGSNLN------------- 182
            |||      .|.|||||             |:..|||          |||::             
  Fly    79 DSR------DSAGGGGGDFSESLSIASEMVGKVIGRG----------GSNISRIQNDFNVRVKLD 127

  Fly   183 ------------EQTAEDGQAQQQQQPRN--DRWQEPERPAGFDGSEGGQSAGGNRSYNNRGERG 233
                        :....|.....::|..|  ||.|:.:                ||.:.:.....
  Fly   128 KCDLIVKITGSIQSNVIDAINHVRKQVTNSGDRGQDRD----------------NRDHGSNERYD 176

  Fly   234 GGGYNSRWKEGGGSNVDYTKLGARDERLEVELFG-----------VGNTGINFDK--------YE 279
            ||||: |:|   |::.::....:...:...:|.|           :..|...:.|        |:
  Fly   177 GGGYD-RYK---GNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYK 237

  Fly   280 DIPVEAT--------------------------GQNVPP---NITSFDDV------QLTEIIRNN 309
            :.|..|.                          |:..||   .:.:|:..      .|.||.:..
  Fly   238 EAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMG 302

  Fly   310 VALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVP-ILNQMYELGHVPPPQSTRQYS 373
                 :.||:|:|..|.||::.|.|::..||||:|||.|||:| :::..|:    ..|:.||..:
  Fly   303 -----FSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQ----STPRGTRGGA 358

  Fly   374 RRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGR 438
            .      .||||||||||.||..|.||:::|. |:...:|||.|.:.|:.:|:||..:|:.||||
  Fly   359 N------VLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERGAEIIICTPGR 416

  Fly   439 LEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQE 503
            |.|:|....:.:..|.:|||||||||||||||||||:::  |::.|  .|||:|.|||:|..::.
  Fly   417 LNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVM--LDIRP--DRQTIMTSATWPPGVRR 477

  Fly   504 LASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLT----LI 564
            ||..::.|.|.:.||.:...:.:..:.|:.:.|.|     :|..::|   ..:.|:..:    :|
  Fly   478 LAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDD-----MDKFNTI---TSFVKNMSSTDKIII 534

  Fly   565 FVETKKGAD------SLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGL 623
            |...|..||      :|:.|:.||      |||:|.|.:||:|:...:||...|||||.||:|||
  Fly   535 FCGRKVRADDLSSELTLDGFMTQC------IHGNRDQMDREQAIADIKSGVVRILVATDVASRGL 593

  Fly   624 DIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSF 688
            ||..:.||||:|.|.::||||||:|||||.|..|.:.|||..::..:..:|:|:|.|.:||:|..
  Fly   594 DIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDE 658

  Fly   689 MEDMSSDRGHGGAKRAGRGGG-GRYGGGFGSRDYRQSSGGGGGGR 732
            :.:|:........|||..||| |..||.||        ||.||||
  Fly   659 LHNMARRFKAMKDKRAAEGGGFGGRGGRFG--------GGRGGGR 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 104/290 (36%)
SF2_C_DEAD 527..663 CDD:350174 57/145 (39%)
CG7878NP_649767.1 KH_1 92..152 CDD:459630 8/69 (12%)
DEAD-like_helicase_N 174..663 CDD:475120 180/526 (34%)

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