DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and Rm62

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:689 Identity:256/689 - (37%)
Similarity:339/689 - (49%) Gaps:138/689 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GEYRRGGGGGGRGFNRQSGDYGYGSGGGGRRGGGGRFEDNYNG---GEFDSRRG--GDWNRSGGG 157
            |...|||.||.||     ||...|.||||.|.|||....:|:|   |..:.||.  |..||.|||
  Fly   153 GHSGRGGRGGDRG-----GDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGG 212

  Fly   158 GGGGRGFGRGPSYRGGGGGSGSNLNEQTAEDGQAQQQQQPRNDRWQEPERPAGFDGSEGGQSAGG 222
            ||.|       ..||||||...:|                       |.||              
  Fly   213 GGFG-------DRRGGGGGGSQDL-----------------------PMRP-------------- 233

  Fly   223 NRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVELFGVGN-TGINFDKY-EDIPVEA 285
                                      ||::.|....:....|...|.| :.....:| |:..:..
  Fly   234 --------------------------VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITV 272

  Fly   286 TGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFL 350
            .|| ||..|..|.:|.|.:.:...:....|..||.:|....||.::|.:.:..|:||||||..::
  Fly   273 RGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYI 336

  Fly   351 VPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGG 415
            :|      .:.|:    :.:|..:|...|:.||||||||||.||.:.|.:|...|.:|...::||
  Fly   337 LP------AIVHI----NNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGG 391

  Fly   416 NNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQL 480
            .....|||:|.|||.:::||||||.|.::.|...|:...:|||||||||||||||||||:||.|:
  Fly   392 APKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI 456

  Fly   481 NMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLL 544
            .    ..|||||:|||:||::::||.|||.|||.:.:|.:. |.:.||.|.:....|..|...|.
  Fly   457 R----PDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLK 517

  Fly   545 DLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGD 609
            .|||.|.|..|  .....:||||||:..|:|..|:........:||||::|.||:..||.||||.
  Fly   518 TLLSDIYDTSE--SPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGK 580

  Fly   610 CPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDL 674
            ..|||||.|||||||:..:|:|||||.|.:.|:|:||||||||....|.:.:||.:.|......|
  Fly   581 SNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKAL 645

  Fly   675 LELLIETKQEIPSFMEDMSSDRGHGGAKRAGRGGGGRYGGGFGSRDYRQSSGGGGGGRSGPPPRS 739
            :::|.|..|||...:|:::.:..:.|.     ||..|||            |||||||.      
  Fly   646 VDVLREANQEINPALENLARNSRYDGG-----GGRSRYG------------GGGGGGRF------ 687

  Fly   740 GGSGSGGGGGSYRSNGNSYGKFGGNSGGGGYYGGGAGGG 778
                  ||||.         |.|..|.|.|:.|||.|||
  Fly   688 ------GGGGF---------KKGSLSNGRGFGGGGGGGG 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 104/248 (42%)
SF2_C_DEAD 527..663 CDD:350174 63/135 (47%)
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 187/494 (38%)

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