DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and ddx46

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001019988.2 Gene:ddx46 / 321948 ZFINID:ZDB-GENE-030131-667 Length:1035 Species:Danio rerio


Alignment Length:712 Identity:202/712 - (28%)
Similarity:319/712 - (44%) Gaps:156/712 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GSGSNLNEQTAEDGQAQQQQQPRNDRWQEPERPAGFDGSEG------GQSAGGNRSYNNRGERGG 234
            |...:|.:...:|.:|....:|..|..:|.::.|..:.||.      |:......:|....:...
Zfish   163 GKKWSLEDDDDDDEEAPAPVEPDGDDEEEQDKAAEAEESERMEEEEVGEEVDPLDAYMEEVKEEV 227

  Fly   235 GGYNSRWKEG-----GGSNV---------------------------DYTKLGARDERLEVE--- 264
            ..:|....:|     ||.:|                           |..:..:.:|.::::   
Zfish   228 KKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPHATKKKGELMENDQDAMEYSSEEEEVDLQTAL 292

  Fly   265 ----------LFGVGNTGINFDK-----YEDIP-------------------VEATGQNVPPNIT 295
                      |..|.:..|.::.     |.::|                   :...|:..|..|.
Zfish   293 TGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIK 357

  Fly   296 SFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYEL 360
            ::....::..:.|.:....|:||||:|..|||.|::||||:..|:||||||.|||:|:...:.:.
Zfish   358 TWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQ 422

  Fly   361 GHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMREL 425
            ..|...:.          ||.:::.||||||.||.:|.|||:....:|...:|||...|||:.||
Zfish   423 RPVGEAEG----------PLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAEL 477

  Fly   426 DRGCHLIVATPGRLEDMI--TRGKV-GLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQ 487
            .||..:||.||||:.||:  ..|:| .|..:.::|:||||||.|||||||:.|||:  |:.|  .
Zfish   478 KRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVD--NVRP--D 538

  Fly   488 RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRD 552
            |||:|||||||:.::.||...||..:.:.||.......::.|.::.:.|..|...||::|.    
Zfish   539 RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILG---- 599

  Fly   553 GPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATA 617
              .|.:....:|||:.::.||.|.:.|.:.::|..|:||...|.:|:..:..|::|.|.:||||:
Zfish   600 --HYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATS 662

  Fly   618 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETK 682
            |||||||:..:..|:|:..|:..|:||||.|||||.||.|.|.:|..|.......|:|:.|..:.
Zfish   663 VAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSG 727

  Fly   683 QEIPSFMEDM-----SSDRGHGGAKRAGRGGGGRYGGGFGSRDYRQS------------------ 724
            ..:|:.:|.:     ...:..|...::..|..|: |..|...::..:                  
Zfish   728 SSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGK-GFKFDETEHALANERKKLQKAALGLHDSDD 791

  Fly   725 ------------------------------SGGGGGGRSGPPPRSGGSGSGGGGGSYRSNGN 756
                                          |.|..||.||    |..:.||.|..|..|.||
Zfish   792 EDTALDIDEQIESMFNSKKRVKDFSAPGSVSAGSAGGVSG----SVSAVSGLGSLSTPSAGN 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 103/273 (38%)
SF2_C_DEAD 527..663 CDD:350174 51/135 (38%)
ddx46NP_001019988.2 Q motif 357..385 6/27 (22%)
DEAD box 514..517 2/2 (100%)

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