DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and glh-3

DIOPT Version :9

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_491681.1 Gene:glh-3 / 172245 WormBaseID:WBGene00001600 Length:720 Species:Caenorhabditis elegans


Alignment Length:594 Identity:206/594 - (34%)
Similarity:305/594 - (51%) Gaps:83/594 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 GGGSGSNLNEQTAEDGQAQQQQQPRNDRWQEPERPAGFDGSEGGQSAGGN--------------- 223
            |....||:.|......::..|....|...::.||    |...||.|:.||               
 Worm   135 GSKRTSNVKENEGSIHRSDDQVSTENCSAKDEER----DRDSGGVSSYGNKRSDEFCGTSPILEA 195

  Fly   224 ------------RSYNNRGER---------GGGGYNSR------WKEGG---GSNVDYTKLGARD 258
                        :.|.:|...         ..|..|.|      |.:.|   .:.|.|..:..:.
 Worm   196 KGFGISNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEPTKVTYVPVVDKM 260

  Fly   259 ERLEVELFGV--GNTGINFDKYEDIPVEATGQNVPPNI---TSFDDVQLTEIIRNNVALARYDKP 318
            |    |:|.:  .|.|..|||:.|..|:...:..|..|   .||.|..:.:.:|.||..|.|.:.
 Worm   261 E----EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321

  Fly   319 TPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQ-YPLGL 382
            ||:|::.:|::.:|:|::||||||||||||||:||::::.       .:....|..... ||..:
 Worm   322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLI-------LEKDLNYGAEGGCYPRCI 379

  Fly   383 VLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGK 447
            :|.||||||.||:.|.:||:|:|.|....:|||.|......::.:||.:||.|.||::.....|.
 Worm   380 ILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGA 444

  Fly   448 VGLENIRFLVLDEADRMLD-MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFL-S 510
            :.|:..|:|||||||||:| |||.|:|.:|:...|||...:|||:|||||||..:||.|...| .
 Worm   445 IKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLRE 509

  Fly   511 NYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKD-------SLTLIFVET 568
            :|..:.:.::|:.::.:.|.........|...||.||..  |...||.:       ..|::||..
 Worm   510 DYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGI--DIDTYTTEKNSDVFVKKTIVFVAQ 572

  Fly   569 KKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVIN 633
            :|.||:|...:.....|..:|||.|.||||..||:.||||..|:|:||||..|||||..|.||||
 Worm   573 QKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVIN 637

  Fly   634 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-EKNRNICSDLLELLIETKQEIPSFMEDMSSDRG 697
            :|:|:::::|:||||||||:||.|.||||.: ..:..|...|:..|.:.:|.:||:|::.:    
 Worm   638 YDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA---- 698

  Fly   698 HGGAKRAGR 706
             ||.....:
 Worm   699 -GGTSNPNK 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc 297..516 CDD:238167 95/221 (43%)
DEXDc 315..529 CDD:214692 90/216 (42%)
Helicase_C 538..654 CDD:278689 57/122 (47%)
glh-3NP_491681.1 PRK11192 300..719 CDD:236877 170/421 (40%)
DEADc 300..509 CDD:238167 94/215 (44%)
Helicase_C 537..658 CDD:278689 57/122 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0335
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S391
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D253442at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.870

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