DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and RIPK1

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:XP_047275401.1 Gene:RIPK1 / 8737 HGNCID:10019 Length:712 Species:Homo sapiens


Alignment Length:788 Identity:164/788 - (20%)
Similarity:264/788 - (33%) Gaps:247/788 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 FNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKP----TVFPLSPEP--DEWEICRTDIMMKHKL 395
            :||.:..|.|...|.......|.|  |..::..|    ..|.:.|:.  :..::..:|.:...:|
Human     2 WNTASGTVAHSCNPSTSEAEGTAL--PGGEKVVPFWAFLSFRMQPDMSLNVIKMKSSDFLESAEL 64

  Fly   396 GGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKD---FLEEAAIMKEMKHPNLVQLIGVCTREPP 457
            ..|.:|:| ...:.|....:.:||:.:....::.   .||||.:|..::|..:|:|:||...|..
Human    65 DSGGFGKV-SLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGK 128

  Fly   458 FYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNK 522
            :.::.|:|..|||:..|::.....|.....:.:  :|..||.||..:..||:||...|.||.::.
Human   129 YSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIIL--EIIEGMCYLHGKGVIHKDLKPENILVDNDF 191

  Fly   523 LVKVADFGLARLMR---------------DDTYTAHAGAKFPIKWTAPEGL--AYNKFSTKSDVW 570
            .:|:||.|||....               |.|...:.|..:   :.|||.|  ...|.:.||||:
Human   192 HIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLY---YMAPEHLNDVNAKPTEKSDVY 253

  Fly   571 AFGVLLWEIATYGMSPY------------------PAIDLTDVYHKLDKGYRMERPPGCPPEVYD 617
            :|.|:||.|.. ...||                  |.:|....|              ||.|:..
Human   254 SFAVVLWAIFA-NKEPYENAICEQQLIMCIKSGNRPDVDDITEY--------------CPREIIS 303

  Fly   618 LMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQL--------NANATSASSSAPSTSGV 674
            ||:.||:.:...||||..|.... ..|..|.:.|:||:.:        |.||......:.....|
Human   304 LMKLCWEANPEARPTFPGIEEKF-RPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCV 367

  Fly   675 ATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGS 739
            |...           :.|:|||..            ||                           
Human   368 AVPS-----------SRSNSATEQ------------PG--------------------------- 382

  Fly   740 TSTKLSTFSSQGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFIDDLST 804
                 |..||||.|...:..:......:.|......||.|..:|.                    
Human   383 -----SLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDE-------------------- 422

  Fly   805 NGIHKLKTANY--FSQTLSRNFKTQIPTHHTHQIRTQQQQQQQSVQQQQQIVPLSVQQQAHQQQQ 867
                    |||  :...:.|..|.| |..:....|.::::::.|..      |.: ||:.::..|
Human   423 --------ANYHLYGSRMDRQTKQQ-PRQNVAYNREEERRRRVSHD------PFA-QQRPYENFQ 471

  Fly   868 KQQQYSIKKSSSCSSFLYDILFRGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAA 932
            ..:......||:.|.                                    |:::.|. |.:.:.
Human   472 NTEGKGTAYSSAASH------------------------------------GNAVHQP-SGLTSQ 499

  Fly   933 PVTNKMQHSLHSGGG-------GGGIGPR------SSQQHSSFKRPT-GTPVMGNRGLETRQSKR 983
            |......:.|:|..|       .|..|||      .|...|....|. .|..:||    |.....
Human   500 PQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGN----TPTMPF 560

  Fly   984 SQLHSQAPGPGPPSTQPHHGNNGVVTSAHPITVGALDVMNVKQVVNRYGTLPKGARIGAYLDSLE 1048
            |.|        ||:.:   .....:.::..|.:||.:.|.:            |....:.|||..
Human   561 SSL--------PPTDE---SIKYTIYNSTGIQIGAYNYMEI------------GGTSSSLLDSTN 602

  Fly  1049 DSSEAAPA 1056
            .:.:..||
Human   603 TNFKEEPA 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189 7/25 (28%)
PTKc_Abl 382..644 CDD:270645 78/299 (26%)
FABD 1584..1723 CDD:197885
RIPK1XP_047275401.1 STKc_RIP1 64..331 CDD:270929 78/288 (27%)
Death_RIP1 624..709 CDD:260048
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.