DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and Src

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_114183.1 Gene:Src / 83805 RGDID:620795 Length:542 Species:Rattus norvegicus


Alignment Length:528 Identity:222/528 - (42%)
Similarity:312/528 - (59%) Gaps:57/528 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 PHIPA------GSTAASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENL 197
            |..||      |..||.:...|||               ..|.||.:|:.:|       ||.:. 
  Rat    37 PSKPASADGHRGPNAAFVPPAAAE---------------PKLFGGFNSSDTV-------TSPQR- 78

  Fly   198 LAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYN-----KSGEWCEAHS-DSGNVGWV 256
              .||.......||||||:::..|..||.||||:::|::..     :.|:|..||| .:|..|::
  Rat    79 --AGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYI 141

  Fly   257 PSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGIN--GSFLVRESESSPGQRSISL----RYEG- 314
            |||||.|.:|::...||.|.|:|..:|.||.:..|  |:|||||||::.|...:|:    ..:| 
  Rat   142 PSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGL 206

  Fly   315 RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEG--HGLITPLLYPAPKQNKPTVFPLSP 377
            .|.||:|.:...|..::|...:||:|.:||.::|...:|  |.|.|  :.|.   :||....|: 
  Rat   207 NVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTT--VCPT---SKPQTQGLA- 265

  Fly   378 EPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT-VAVKTLKEDTMALKDFLEEAAIMKEMK 441
             .|.|||.|..:.::.|||.|.:|||:...|.  |.| ||:||||..||:.:.||:||.:||:::
  Rat   266 -KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 327

  Fly   442 HPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNY 506
            |..||||..|.:.| |.||:||:|:.|:|||||:....:.|....|:.|:.||||||:|:|..||
  Rat   328 HEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 391

  Fly   507 IHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWA 571
            :||||.|.|.|||:|.:.||||||||||:.|:.|||..||||||||||||...|.:|:.|||||:
  Rat   392 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 456

  Fly   572 FGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSI 636
            ||:||.|:.|.|..|||.:...:|..::::||||..||.||..::|||.|||:.:..:||||:.:
  Rat   457 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 521

  Fly   637 HHALEHMF 644
            ...||..|
  Rat   522 QAFLEDYF 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 26/59 (44%)
SH2_ABL 268..363 CDD:198189 36/103 (35%)
PTKc_Abl 382..644 CDD:270645 134/262 (51%)
FABD 1584..1723 CDD:197885
SrcNP_114183.1 PTKc_Src 266..542 CDD:270656 136/267 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 3/11 (27%)
SH3_Src 88..149 CDD:212941 26/60 (43%)
SH2_Src_Src 153..253 CDD:198228 36/101 (36%)
Blue background indicates that the domain is not in the aligned region.

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