DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and AT5G47070

DIOPT Version :9

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_199518.1 Gene:AT5G47070 / 834753 AraportID:AT5G47070 Length:410 Species:Arabidopsis thaliana


Alignment Length:393 Identity:103/393 - (26%)
Similarity:163/393 - (41%) Gaps:66/393 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 NTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDE-------WEICRTDIMMKHKL 395
            |:..||.:....  ....|.||...|:|:..|    .|..|.::       .|:.:...:...||
plant    32 NSAPELTNRSET--SSFNLQTPRSLPSPRSIK----DLYTEREQNLRVFSYEELSKATYVFSRKL 90

  Fly   396 --GGGQYGEVYEAVWKRYGNT------VAVKTL-KEDTMALKDFLEEAAIMKEMKHPNLVQLIGV 451
              |.|.:|.||:......|::      ||:|.| ::.....|.:|.|...:..:.|||:|:|||.
plant    91 VIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGY 155

  Fly   452 CTREPPF----YIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLA 512
            |:.:...    .::.|:||:.:|.|.|......||.....|.:....|.|::||.....|:||..
plant   156 CSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDLKVIYRDFK 220

  Fly   513 ARNCLVGDNKLVKVADFGLAR--LMRDDTY--TAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFG 573
            :.|.|:.|....|::||||||  ...|:|:  ||..|..   .:.|||.:.......||||::||
plant   221 SSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTH---GYAAPEYVQTGHLRLKSDVYSFG 282

  Fly   574 VLLWEIATYG------------------MSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMR 620
            |:|:||.| |                  :..||| |.......:|...|...|......:..|..
plant   283 VVLYEIIT-GRRTIERNKPVAERRLLDWVKEYPA-DSQRFSMIVDPRLRNNYPAAGARSLAKLAD 345

  Fly   621 QCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSA----------PSTSGVA 675
            .|.:.:..:|||.:.:...|:.:.:||   ::.:..:....|..||..          .|..||:
plant   346 LCLKKNDKERPTMEIVVERLKKIIEES---DSEDYPMATTTTKESSQVRRRQVAKPEKQSLRGVS 407

  Fly   676 TGG 678
            ..|
plant   408 VRG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189 6/24 (25%)
PTKc_Abl 382..644 CDD:270645 83/296 (28%)
Pkinase_Tyr 389..640 CDD:285015 81/285 (28%)
FABD 1584..1723 CDD:197885
AT5G47070NP_199518.1 STYKc 91..365 CDD:214568 79/278 (28%)
STKc_IRAK 92..368 CDD:270968 80/280 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.