DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and CTR1

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_195993.1 Gene:CTR1 / 831748 AraportID:AT5G03730 Length:821 Species:Arabidopsis thaliana


Alignment Length:843 Identity:204/843 - (24%)
Similarity:299/843 - (35%) Gaps:273/843 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LSSSPVASVSPHCISSSSGVSSAPLGGGSTLRGSRIKSSSSGVASGSGSG------GGGGGSGSG 85
            :|.|...:..||..|.||.            ..|...|.::|.|.....|      |||||    
plant    21 VSVSVTGAPPPHYDSLSSE------------NRSNHNSGNTGKAKAERGGFDWDPSGGGGG---- 69

  Fly    86 LSQRSGGHKDARCN--PT-VGLNIFTEHNGTKH----SSF--RGHPGKYHMNLEALLQSRPLPHI 141
                     |.|.|  |. ||.|::....|.:.    |||  ....|.|:|              
plant    70 ---------DHRLNNQPNRVGNNMYASSLGLQRQSSGSSFGESSLSGDYYM-------------- 111

  Fly   142 PAGSTAASLLADAAELQQHQQDSG---GLGLQGSSL--------GGGHSSTTSVFES-------- 187
            |..|.||:.:    |.....||.|   |.|..|..|        .||.||..|..:.        
plant   112 PTLSAAANEI----ESVGFPQDDGFRLGFGGGGGDLRIQMAADSAGGSSSGKSWAQQTEESYQLQ 172

  Fly   188 ---AHRWTSK------ENLLAPGPEED-------------------------------------- 205
               |.|.:|:      .|.|.|.|:|.                                      
plant   173 LALALRLSSEATCADDPNFLDPVPDESALRTSPSSAETVSHRFWVNGCLSYYDKVPDGFYMMNGL 237

  Fly   206 DPQLFVALYDFQAGG-----ENQLSLKKG------------------------------------ 229
            ||.::....|....|     |:..::..|                                    
plant   238 DPYIWTLCIDLHESGRIPSIESLRAVDSGVDSSLEAIIVDRRSDPAFKELHNRVHDISCSCITTK 302

  Fly   230 ---EQVRILSYNKSG------------EWCEAHSDSGNVGWVPSNYVTPLNSLEKHSWYHGPI-- 277
               :|:..|..|:.|            .|.|.......:..|    |.|:.||......|..:  
plant   303 EVVDQLAKLICNRMGGPVIMGEDELVPMWKECIDGLKEIFKV----VVPIGSLSVGLCRHRALLF 363

  Fly   278 ---------------------SRNAAEYLLSSGINGSFLVR---------ESES---SPGQRSIS 309
                                 ..:||..|:..|::..:||.         |.:|   .|...|||
plant   364 KVLADIIDLPCRIAKGCKYCNRDDAASCLVRFGLDREYLVDLVGKPGHLWEPDSLLNGPSSISIS 428

  Fly   310 --LRY----------EGRVYHYRISEDPDGKVFVTQEAKFNTLAELVH---------HHSVPHEG 353
              ||:          :.|:...:...|......|...|..:....:.|         :.::...|
plant   429 SPLRFPRPKPVEPAVDFRLLAKQYFSDSQSLNLVFDPASDDMGFSMFHRQYDNPGGENDALAENG 493

  Fly   354 HGLITPLLYPAPK-----QNKPTVFPLSPEP-----------------DEWEICRTDIMMKHKLG 396
            .|.:.|.....|:     .|:....|::..|                 |:.:|...|:.:|.|:|
plant   494 GGSLPPSANMPPQNMMRASNQIEAAPMNAPPISQPVPNRANRELGLDGDDMDIPWCDLNIKEKIG 558

  Fly   397 GGQYGEVYEAVWKRYGNTVAVKTLKEDTM---ALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPF 458
            .|.:|.|:.|.|  :|:.||||.|.|...   .:.:||.|.||||.::|||:|..:|..|:.|..
plant   559 AGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 621

  Fly   459 YIITEFMSHGNLLDFLRSAG-RETLDAVALLYMATQIASGMSYLESRN--YIHRDLAARNCLVGD 520
            .|:||::|.|:|...|..:| ||.||....|.||..:|.||:||.:||  .:||||.:.|.||..
plant   622 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDK 686

  Fly   521 NKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMS 585
            ...|||.||||:||......::.:.|..| :|.|||.|.....:.||||::|||:|||:||. ..
plant   687 KYTVKVCDFGLSRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQ 749

  Fly   586 PYPAIDLTDVYHKLD-KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQES 647
            |:..::...|...:. |..|:|.|....|:|..::..||..:...||:|.:|...|..:.:.:
plant   750 PWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 12/109 (11%)
SH2_ABL 268..363 CDD:198189 23/150 (15%)
PTKc_Abl 382..644 CDD:270645 103/268 (38%)
FABD 1584..1723 CDD:197885
CTR1NP_195993.1 EDR1 207..412 CDD:433922 24/208 (12%)
STKc_MAP3K-like 557..805 CDD:270901 98/251 (39%)
Blue background indicates that the domain is not in the aligned region.

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