DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and AT4G23050

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_849424.1 Gene:AT4G23050 / 828404 AraportID:AT4G23050 Length:736 Species:Arabidopsis thaliana


Alignment Length:593 Identity:155/593 - (26%)
Similarity:252/593 - (42%) Gaps:134/593 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EH------NGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTA-ASLLADAAELQQHQQDSGG 166
            ||      |....|:.|.|  ::|:....:..:..:|.:|..|:| ||.|..:..|.|...|   
plant   213 EHQQQARSNNRHESNLRKH--QWHLPRPQIAAASQVPVVPQYSSAVASNLKASKLLPQRNGD--- 272

  Fly   167 LGLQGSSLGGGHSS----------TTSVFES----AHRWTSK---ENLLAPGPEEDDPQLFVALY 214
                 .|..|.|:|          .::.||.    |.::..|   :...:.|.|:::|.|     
plant   273 -----DSFNGNHNSRSRDENVPVVASTTFEKYGSLADKFLGKLQRKITGSQGTEDNEPIL----- 327

  Fly   215 DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISR 279
               ..|.|:.:...|..    |...:...|.|..|:||        ..|..:..:.|..:|    
plant   328 ---RNGINKSACGSGGS----SKASNAVTCTAFRDNGN--------GKPKRAEVRISDVYG---- 373

  Fly   280 NAAEYLLSSGINGSFLVRESESSP----------GQRSISLR-YEGRV---YHYRISEDPDGKVF 330
            |.||.|:.:|....::....:|.|          |.|...:. ..|.:   ::.|:|.||     
plant   374 NGAEGLIHNGDRFQYIGNLGQSKPPRGLESGLVSGMRGTKMSDLNGEIEDAWNTRLSVDP----- 433

  Fly   331 VTQEAKFNTLAELVHHHSVPHEGHGLITPLL--------YPAPKQNKPTVFPLSPEPDEWEICRT 387
                                       .|:|        .|..::|...|...|.| ..||    
plant   434 ---------------------------LPILGVNSGRQQSPVNQRNNRLVTDSSCE-IRWE---- 466

  Fly   388 DIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKE---DTMALKDFLEEAAIMKEMKHPNLVQLI 449
            |:.:..::|.|.:..|:..||.  |:.||:|...:   :.|.|.:..:|..|||:::|||::..:
plant   467 DLQLGEEVGRGSFAAVHRGVWN--GSDVAIKVYFDGDYNAMTLTECKKEINIMKKLRHPNVLLFM 529

  Fly   450 G-VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRN--YIHRDL 511
            | |||.|.. .||.|:|..|:|...|.:. .:.||....|.||..:|.||:||..||  .:||||
plant   530 GAVCTEEKS-AIIMEYMPRGSLFKILHNT-NQPLDKKRRLRMALDVARGMNYLHRRNPPIVHRDL 592

  Fly   512 AARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLL 576
            .:.|.||..|..|||.||||:: .::.|:.:....|...:|.|||.|.....:.|.||::|||:|
plant   593 KSSNLLVDKNWNVKVGDFGLSK-WKNATFLSTKSGKGTPQWMAPEVLRSEPSNEKCDVFSFGVIL 656

  Fly   577 WEIATYGMSPYP---AIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHH 638
            ||:.| .:.|:.   :|.:..|...:|:  |::.|.|..|.:..:::.|||.|...||:|:.:..
plant   657 WELMT-TLVPWDRLNSIQVVGVVGFMDR--RLDLPEGLNPRIASIIQDCWQTDPAKRPSFEELIS 718

  Fly   639 ALEHMFQE 646
            .:..:|::
plant   719 QMMSLFRK 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 10/53 (19%)
SH2_ABL 268..363 CDD:198189 18/116 (16%)
PTKc_Abl 382..644 CDD:270645 92/270 (34%)
FABD 1584..1723 CDD:197885
AT4G23050NP_849424.1 PAS 92..>202 CDD:441804
STKc_MAP3K-like 474..720 CDD:270901 89/253 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.