DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and ATMRK1

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_191885.1 Gene:ATMRK1 / 825501 AraportID:AT3G63260 Length:391 Species:Arabidopsis thaliana


Alignment Length:373 Identity:112/373 - (30%)
Similarity:162/373 - (43%) Gaps:74/373 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTV 415
            |.|....:.:|..:...:.|     :|...||||..:.:.|||.|..|.||.||..|:.  |..|
plant    50 HMGQTSTSSVLTNSASTSAP-----APAMQEWEIDLSKLDMKHVLAHGTYGTVYRGVYA--GQEV 107

  Fly   416 AVKTLK--ED-------TMALK-DFLEEAAIMKEMKHPNLVQLIGVC-----TREPP-------- 457
            |||.|.  ||       |.||: .|.:|.|:.:::.|||:.:.||..     .|.||        
plant   108 AVKVLDWGEDGYATPAETTALRASFEQEVAVWQKLDHPNVTKFIGASMGTSDLRIPPAGDTGGRG 172

  Fly   458 --------FYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR 514
                    ..::.|:::.|.|..||....|..|....::.:|..:|.|:|||.|:..:|||:.:.
plant   173 NGAHPARACCVVVEYVAGGTLKKFLIKKYRAKLPIKDVIQLALDLARGLSYLHSKAIVHRDVKSE 237

  Fly   515 NCLVGDNKLVKVADFGLARL--MRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLW 577
            |.|:..||.:|:||||:||:  ......|...|.   :.:.|||.|....::.|.||::|||.||
plant   238 NMLLQPNKTLKIADFGVARVEAQNPQDMTGETGT---LGYMAPEVLEGKPYNRKCDVYSFGVCLW 299

  Fly   578 EIATYGMSPYPAIDLTDVYHK-LDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALE 641
            ||....| ||......::.|. :.:..|.|.|..||..|.::|::||..:...||..        
plant   300 EIYCCDM-PYADCSFAEISHAVVHRNLRPEIPKCCPHAVANIMKRCWDPNPDRRPEM-------- 355

  Fly   642 HMFQESSITEAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGC 689
                     |.|.|.|.|..||            .|||........||
plant   356 ---------EEVVKLLEAIDTS------------KGGGMIAPDQFQGC 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189 3/11 (27%)
PTKc_Abl 382..644 CDD:270645 94/295 (32%)
FABD 1584..1723 CDD:197885
ATMRK1NP_191885.1 STKc_MAP3K-like 89..362 CDD:270901 91/295 (31%)
Blue background indicates that the domain is not in the aligned region.

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