DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and AT3G50730

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_190642.2 Gene:AT3G50730 / 824237 AraportID:AT3G50730 Length:371 Species:Arabidopsis thaliana


Alignment Length:336 Identity:107/336 - (31%)
Similarity:160/336 - (47%) Gaps:50/336 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 YPAPKQ--NKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDT 424
            ||:..:  ::|..|.:|   .|..:.|.|:::...:|.|.|..||:.: .|....||||.:...|
plant    10 YPSHNESDDEPFHFSIS---RELLLDRNDVVVGEMIGEGAYSIVYKGL-LRNQFPVAVKIMDPST 70

  Fly   425 MAL------KDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLD 483
            .:.      |.|.:|..::.:|||.|:|:.:|.|. ||...|:||.:..|.|..|:.|. ...||
plant    71 TSAVTKAHKKTFQKEVLLLSKMKHDNIVKFVGACI-EPQLIIVTELVEGGTLQRFMHSR-PGPLD 133

  Fly   484 AVALLYMATQIASGMSYLESRNYIHRDLAARNCLV-GDNKLVKVADFGLARLMRDDTYTAHAGAK 547
            ....|..|..|:..|.::.|...|||||..||.|| ||.|.||:||||:||.......|..||..
plant   134 LKMSLSFALDISRAMEFVHSNGIIHRDLNPRNLLVTGDLKHVKLADFGIAREETRGGMTCEAGTS 198

  Fly   548 FPIKWTAPEGLAYN----------KFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKG 602
               ||.||| :.|:          ::..|:|:::|.::||::.| ...|:|     ||.:.|...
plant   199 ---KWMAPE-VVYSPEPLRVGEKKEYDHKADIYSFAIVLWQLVT-NEEPFP-----DVPNSLFVP 253

  Fly   603 YRME--RPP--GCPPEVY-DLMRQCWQWDATDRPTFKSIH----HALEHMFQESSI------TEA 652
            |.:.  |.|  ...|:|: .::..||..|...||.||.|.    :.|..|..:|||      .||
plant   254 YLVSQGRRPILTKTPDVFVPIVESCWAQDPDARPEFKEISVMLTNLLRRMSSDSSIGTTLPDGEA 318

  Fly   653 VEKQLNANATS 663
            .|.::..:..|
plant   319 YEGEMEESENS 329

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784