DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and ptk6b

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001070140.1 Gene:ptk6b / 767734 ZFINID:ZDB-GENE-060929-1150 Length:511 Species:Danio rerio


Alignment Length:476 Identity:189/476 - (39%)
Similarity:289/476 - (60%) Gaps:24/476 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 ESAHRWTSKENLLAPGP--EEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHS 248
            |:..|: ||..:..|.|  ..::..:::||:||:|..:.:||.|.|::..|.  ::||:|..|:.
Zfish    46 ETERRY-SKPKIKPPLPPSANNNAAIYMALWDFKARNDQELSFKAGDKFEIT--DRSGDWWTANK 107

  Fly   249 DS--GNV--GWVPSNYVTPLNSLEKHSWYHGPISR-NAAEYLLSSGIN-GSFLVRESESSPGQRS 307
            ..  |.|  |:||.||:. .:|:|...|:.|.::| .|..:|:|...| ||||||.|||......
Zfish   108 KDIFGRVTTGFVPYNYLA-RDSVESQPWFFGKMNRVGAVSHLMSDENNYGSFLVRVSESDDMGYV 171

  Fly   308 ISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGL-ITPLLYPAPKQNKPT 371
            :|:|.:....|::|.:..| :.:|....||:::.|::.|    ::.|.| |..||.....:.||.
Zfish   172 LSVRTKENAKHFKIFQTGD-QFYVDALFKFSSIVEVIEH----YQSHPLSIGDLLSEPCIRIKPE 231

  Fly   372 VFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLK-EDTMALKDFLEEAA 435
            ..| .|..||||:.:.:..::::||.|.:.:||...||.: :.||:|.|| .|.:.|::|..|..
Zfish   232 NVP-PPSTDEWELPKEEFQLENQLGSGHFADVYSGKWKNH-SKVAIKILKNNDALVLREFQLEVQ 294

  Fly   436 IMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY 500
            |||.::|.:|:.|..|||...|||||||.:..|:||.|||:....:|...:|:.||.|:|.||:|
Zfish   295 IMKRLRHKHLISLFAVCTSSSPFYIITELIEKGDLLHFLRNPEGRSLQMESLIDMAAQVADGMAY 359

  Fly   501 LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFST 565
            ||:.|.|||||||||.||||..:.|:|||||||::::..|.:. ..|.|.||||||.:.:..:|:
Zfish   360 LEANNSIHRDLAARNVLVGDGYVCKIADFGLARIIKEPVYLSD-DKKIPYKWTAPEAIGHGTYSS 423

  Fly   566 KSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDK-GYRMERPPGCPPEVYDLMRQCWQWDATD 629
            |||||:||:||:||.|:|..|||.::..:||..:.| .|||..||.||..:|::||.||:.::.|
Zfish   424 KSDVWSFGILLYEIVTHGGIPYPGVNTGEVYDLITKENYRMPSPPKCPQAIYNIMRACWRIESVD 488

  Fly   630 RPTFKSIHHALE-HMFQESSI 649
            ||.||.:...|: :..|.||:
Zfish   489 RPNFKVLKDELDNYQGQYSSV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 21/57 (37%)
SH2_ABL 268..363 CDD:198189 32/97 (33%)
PTKc_Abl 382..644 CDD:270645 120/264 (45%)
FABD 1584..1723 CDD:197885
ptk6bNP_001070140.1 SH3_Brk 70..126 CDD:212781 21/58 (36%)
SH2 132..216 CDD:214585 27/88 (31%)
PTKc_Srm_Brk 241..502 CDD:133248 120/262 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.