DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and Matk

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:XP_038935769.1 Gene:Matk / 60450 RGDID:69058 Length:496 Species:Rattus norvegicus


Alignment Length:529 Identity:173/529 - (32%)
Similarity:256/529 - (48%) Gaps:86/529 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 RWTSKENLLAPGP------EEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA-H 247
            ||       |||.      |...|:            ..:|:.:||:.|.||...:...|..| |
  Rat     5 RW-------APGTQCMTKCENSRPK------------PGELAFRKGDMVTILEACEDKSWYRAKH 50

  Fly   248 SDSGNVGWVPSNYVTPLNSLEKH------SWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQR 306
            ..||..|.:.:..:....:|...      .|:||.||...|...|....:|.||||||...||..
  Rat    51 HSSGQEGLLAAAALRQREALSTDPKLSLMPWFHGKISGQEAIQQLQPPEDGLFLVRESARHPGDY 115

  Fly   307 SISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPT 371
            .:.:.:...|.|||:.. .||.:.:.:...|..|.::|.|::  .:...:.|.|:.|..||... 
  Rat   116 VLCVSFGRDVIHYRVLH-RDGHLTIDEAVCFCNLMDMVEHYT--RDKGAICTKLVKPKRKQGAK- 176

  Fly   372 VFPLSPEPD----EWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLE 432
                |.|.:    .|.:....:.:..::|.|::|.|.:..:  .|..||||.:|.|..| :.||:
  Rat   177 ----SAEEELAKAGWLLDLQHLTLGAQIGEGEFGAVLQGEY--LGQKVAVKNIKCDVTA-QAFLD 234

  Fly   433 EAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASG 497
            |.|:|.:::|.|||:|:||.... ..||:.|.:|.|||::|||:.||..:....||..|..:|.|
  Rat   235 ETAVMTKLQHRNLVRLLGVILHH-GLYIVMEHVSKGNLVNFLRTRGRALVSTSQLLQFALHVAEG 298

  Fly   498 MSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNK 562
            |.||||:..:||||||||.||.::.:.||:|||||:.   :.......::.|:||||||.|...:
  Rat   299 MEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKA---ELRKGLDSSRLPVKWTAPEALKNGR 360

  Fly   563 FSTKSDVWAFGVLLWEIATYGMSPYPAI-----------------------------DLTDVYHK 598
            ||:|||||:|||||||:.:||.:|||.:                             .|.:|...
  Rat   361 FSSKSDVWSFGVLLWEVFSYGRAPYPKMVSSTPGRAACASRVTDCPHPCYPLPPYLQSLKEVSEA 425

  Fly   599 LDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATS 663
            ::||||||.|..||..|:.||..||:.:.:.||.|:.|   :|.:.:|   ..:|.....|....
  Rat   426 VEKGYRMEPPDSCPGPVHTLMGSCWEAEPSRRPPFRKI---VEKLGRE---LRSVGVAAPAGGQE 484

  Fly   664 ASSSAPSTS 672
            |..|||:.|
  Rat   485 AEGSAPTRS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 12/54 (22%)
SH2_ABL 268..363 CDD:198189 28/100 (28%)
PTKc_Abl 382..644 CDD:270645 112/290 (39%)
FABD 1584..1723 CDD:197885
MatkXP_038935769.1 SH3 9..67 CDD:473055 15/69 (22%)
SH2_csk_like 77..174 CDD:198190 30/99 (30%)
Protein Kinases, catalytic domain 187..470 CDD:473864 112/292 (38%)
Blue background indicates that the domain is not in the aligned region.

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