DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and fgfr3

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:XP_009305459.1 Gene:fgfr3 / 58129 ZFINID:ZDB-GENE-000816-1 Length:820 Species:Danio rerio


Alignment Length:707 Identity:186/707 - (26%)
Similarity:292/707 - (41%) Gaps:207/707 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 AGSTAASL--LADAAELQQHQQDSGGLGLQG--------SSLGGGHSSTTSVFESAH---RWTSK 194
            ||:...|:  |.:..|.:..|: .||:.|:.        |::.....:.|.|.::.:   :.|.:
Zfish   191 AGNPTPSIHWLKNGKEFKGEQR-MGGIKLRDQQWSLVMESAVPSDRGNYTCVVQNKYGTIKHTYQ 254

  Fly   195 ENLLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS-GNVGWVPS 258
            .::|...|..  |.|       |||.....::..|..|..        .|:.:||: .::.|   
Zfish   255 LDVLERSPHR--PIL-------QAGLPANQTVVVGSDVEF--------HCKVYSDAQPHIQW--- 299

  Fly   259 NYVTPLNSLEKHSWYHGPISRNAAEY--LLSSGINGSFLVRE----------SESSPGQRSISLR 311
                 |..:|.:...:||   |.|.|  :|.|.::.   |:|          ||...||      
Zfish   300 -----LKHIEVNGSQYGP---NGAPYVNVLKSFVSN---VKEAQDTLTVYNVSEKDAGQ------ 347

  Fly   312 YEGRVYHY--------------------RISEDPDGKVFVTQEAKF--------------NTLAE 342
            |..|.:::                    |..:..|..::||....|              ||...
Zfish   348 YWCRAHNFLGMSENSFWLTVSQPAVEMEREDDYADILIYVTSCVLFILTMVIIILCRMWINTQKT 412

  Fly   343 LVHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLS------------------------------- 376
            |                   |||...|.:.|||.                               
Zfish   413 L-------------------PAPPVQKLSKFPLKRQQVSLESNSSMNSNTPLVRIARLSSSDGPM 458

  Fly   377 ---------PEPDEWEICRTDIMMKHKLGGGQYGEVYEA----VWKRYGN---TVAVKTLKED-- 423
                     |...:||..||.:.:...||.|.:|:|..|    :.|...|   |||||.||:|  
Zfish   459 LPNVSELELPSDPKWEFTRTKLTLGKPLGEGCFGQVVMAEAIGIDKEKPNKPLTVAVKMLKDDGT 523

  Fly   424 TMALKDFLEEAAIMKEM-KHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS----------- 476
            ...|.|.:.|..:||.: ||.|::.|:|.||::.|.|::.|:.|.|||.::||:           
Zfish   524 DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFD 588

  Fly   477 ---AGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRD- 537
               ...|||....|:..|.|:|.||.||.|:..|||||||||.||.::.::|:|||||||.:.: 
Zfish   589 TCKIPNETLTFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNI 653

  Fly   538 DTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKG 602
            |.|......:.|:||.|||.|....::.:||||::|||||||.|.|.||||.|.:.:::..|.:|
Zfish   654 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSYGVLLWEIFTLGGSPYPGIPVEELFKLLKEG 718

  Fly   603 YRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSS 667
            :||::|..|..|:|.:||:||....:.||||:.:....:.:...:|..|.::  |:......|.:
Zfish   719 HRMDKPANCTHELYMIMRECWHAVPSQRPTFRQLVEDHDRVLSMTSTDEYLD--LSVPFEQYSPT 781

  Fly   668 APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQALTPNAHHND 724
            .|.::              |.|:|...:..:....|:         :...|..||::
Zfish   782 CPDSN--------------STCSSGDDSVFAHDPLPE---------EPCLPKHHHSN 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 10/54 (19%)
SH2_ABL 268..363 CDD:198189 24/140 (17%)
PTKc_Abl 382..644 CDD:270645 115/286 (40%)
FABD 1584..1723 CDD:197885
fgfr3XP_009305459.1 Ig 46..120 CDD:472250
Ig strand B 70..74 CDD:409353
Ig strand C 82..86 CDD:409353
Ig strand E 103..107 CDD:409353
IgI_2_FGFR 163..257 CDD:409443 13/66 (20%)
Ig strand A 163..166 CDD:409443
Ig strand A' 174..179 CDD:409443
Ig strand B 183..191 CDD:409443 186/707 (26%)
Ig strand C 197..202 CDD:409443 1/4 (25%)
Ig strand C' 205..207 CDD:409443 0/1 (0%)
Ig strand D 216..219 CDD:409443 0/2 (0%)
Ig strand E 223..228 CDD:409443 0/4 (0%)
Ig strand F 237..244 CDD:409443 2/6 (33%)
Ig strand G 247..257 CDD:409443 1/9 (11%)
IgI_3_FGFR 265..366 CDD:409363 28/135 (21%)
Ig strand A 265..268 CDD:409363 2/9 (22%)
Ig strand A' 272..276 CDD:409363 0/3 (0%)
Ig strand B 284..291 CDD:409363 1/14 (7%)
Ig strand C 295..302 CDD:409363 2/14 (14%)
Ig strand D 317..322 CDD:409363 1/4 (25%)
Ig strand E 333..338 CDD:409363 0/4 (0%)
Ig strand F 346..354 CDD:409363 4/13 (31%)
Ig strand G 357..365 CDD:409363 0/7 (0%)
PTKc_FGFR3 467..800 CDD:173652 124/348 (36%)
Blue background indicates that the domain is not in the aligned region.

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