DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and fgfr1b

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001155204.1 Gene:fgfr1b / 567905 ZFINID:ZDB-GENE-060503-14 Length:740 Species:Danio rerio


Alignment Length:681 Identity:189/681 - (27%)
Similarity:283/681 - (41%) Gaps:185/681 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QRSGGHKDARCNPTVGLN-------------IFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLP 139
            ||.||:|......|:.:.             :..|:....|:        |.:::......||:.
Zfish   121 QRIGGYKLREHMWTIIMESVVPSDKGNYTCLVENEYGSINHT--------YQLDVVERSPHRPIL 177

  Fly   140 H--IPAGSTA---------ASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTS 193
            :  :||..||         ..:.:|.   |.|.|....:.:.||.||........|.::|     
Zfish   178 YAGLPANRTAVVGSDVEFVCKVFSDP---QPHIQWLKHIRVNGSQLGPDGLPYVRVLKTA----- 234

  Fly   194 KENLLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEW-CEAHSDSGNVGWVP 257
                   |....|.::.|.                  |:|.:|:..:||: |.|.:..|      
Zfish   235 -------GLNTTDKEMEVL------------------QLRNVSFEDAGEYTCLAGNSIG------ 268

  Fly   258 SNYVTPLNSLEKHS-W---YHGPISRNAA---EYL-------------LSSGINGSFLVRES--- 299
                     :..|| |   ...|.:.:|.   .||             |..||.....:|.|   
Zfish   269 ---------ISHHSAWLTVVKAPTAPSAVPSQSYLEVLIYCIGFFLIFLMVGIATIVKIRSSSKK 324

  Fly   300 -------------ESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPH 351
                         :|.|.:|.|:                   |.|...:..|:...||....:..
Zfish   325 SDFNSQLAVHKLAKSIPLRRQIT-------------------VSVESSSSLNSGVMLVRPSRLSS 370

  Fly   352 EGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVY--EAVW--KRYG 412
            .|    ||:|      :..:.:.|..:|. ||:.|..:::...||.|.:|:|.  ||:.  |...
Zfish   371 SG----TPML------SGVSEYELPQDPC-WEVSRERLVLGKPLGEGCFGQVVMGEAIGLDKDKP 424

  Fly   413 N---TVAVKTLKEDTMA--LKDFLEEAAIMKEM-KHPNLVQLIGVCTREPPFYIITEFMSHGNLL 471
            |   .||||.||.|...  |.|.:.|..:||.: ||.|::.|:|.||::.|.|:|.||.|.|||.
Zfish   425 NRITKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEFASKGNLR 489

  Fly   472 DFLRSAGR---------------ETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDN 521
            ::|| |.|               |::....|:..|.|:|.||.||.|:..|||||||||.||.::
Zfish   490 EYLR-ARRPHGMEYCYNPDPLPIESMSIKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 553

  Fly   522 KLVKVADFGLAR-LMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMS 585
            .::|:||||||| :...|.|......:.|:||.|||.|....::.:||||:||||||||.|.|.|
Zfish   554 NVMKIADFGLARDVHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 618

  Fly   586 PYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT 650
            |||.:.:.:::..|.:|:||::|..|..|:|.:|:.||....|.|||||.:...|:......|..
Zfish   619 PYPGVPVEELFKLLREGHRMDKPSACTQELYLMMKDCWHAVPTQRPTFKQLVEDLDRTLSLISNQ 683

  Fly   651 EAVEKQ-----------LNANATSASSSAPS 670
            |.:|..           ||..:::.||...|
Zfish   684 EYLELSVPLEPMYSQVILNERSSTCSSEQDS 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 9/54 (17%)
SH2_ABL 268..363 CDD:198189 25/130 (19%)
PTKc_Abl 382..644 CDD:270645 118/287 (41%)
FABD 1584..1723 CDD:197885
fgfr1bNP_001155204.1 IgI_2_FGFR 73..167 CDD:409443 9/53 (17%)
Ig strand A 73..76 CDD:409443
Ig strand A' 84..89 CDD:409443
Ig strand B 93..101 CDD:409443
Ig strand C 107..112 CDD:409443
Ig strand C' 115..117 CDD:409443
Ig strand D 126..129 CDD:409443 1/2 (50%)
Ig strand E 133..138 CDD:409443 1/4 (25%)
Ig strand F 147..154 CDD:409443 0/6 (0%)
Ig strand G 157..167 CDD:409443 2/17 (12%)
Ig 175..278 CDD:472250 29/150 (19%)
Ig strand B 193..197 CDD:409353 0/3 (0%)
Ig strand C 206..210 CDD:409353 2/3 (67%)
Ig strand E 244..248 CDD:409353 1/21 (5%)
Ig strand F 258..263 CDD:409353 2/4 (50%)
Ig strand G 271..274 CDD:409353 1/2 (50%)
Protein Kinases, catalytic domain 383..684 CDD:473864 121/302 (40%)
Blue background indicates that the domain is not in the aligned region.

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