DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and Eph

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster


Alignment Length:291 Identity:128/291 - (43%)
Similarity:175/291 - (60%) Gaps:17/291 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 EICRTDIMMKHKLGGGQYGEVYEAVWKRYGN-----TVAVKTLK--EDTMALKDFLEEAAIMKEM 440
            ||....|.::..:|||::|:|.....|...|     .||:||||  ....|..|||.||:||.:.
  Fly   735 EIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQF 799

  Fly   441 KHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLR-SAGR-ETLDAVALLYMATQIASGMSYLES 503
            .|||::.|.||.||..|..||||:|.:|:|..||| :.|: :||.   |:.|...||||||||..
  Fly   800 DHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQ---LIVMLRGIASGMSYLSD 861

  Fly   504 RNYIHRDLAARNCLVGDNKLVKVADFGLARLMRD--DTYTAHAGAKFPIKWTAPEGLAYNKFSTK 566
            .||:||||||||.||....:.|:|||||:|.:.:  |.||.. |.|.|::|||||.:|:.||::.
  Fly   862 MNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTR-GGKIPVRWTAPEAIAFRKFTSA 925

  Fly   567 SDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRP 631
            ||||::||:|||:.:||..||......||...::||||:..|..||..:|.||..|||...|.||
  Fly   926 SDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRP 990

  Fly   632 TFKSIHHALEHMFQ--ESSITEAVEKQLNAN 660
            ||.||...|:::.:  :|.:|.....:.:.|
  Fly   991 TFASIVSTLDNLARQPQSLLTTRPSPESDGN 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189
PTKc_Abl 382..644 CDD:270645 125/271 (46%)
FABD 1584..1723 CDD:197885
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211 2/2 (100%)
PTKc_EphR 736..1002 CDD:270629 124/269 (46%)
SAM_1 1029..1092 CDD:425739
Blue background indicates that the domain is not in the aligned region.

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