DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and fgfr2

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:XP_068081038.1 Gene:fgfr2 / 352940 ZFINID:ZDB-GENE-030323-1 Length:840 Species:Danio rerio


Alignment Length:598 Identity:166/598 - (27%)
Similarity:259/598 - (43%) Gaps:147/598 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 HSSTTSVFE-SAHRWTSKENLLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSG 241
            |:.|..|.| |.||                |.|       |||....::::.|:..:.:      
Zfish   265 HTYTLDVVERSPHR----------------PIL-------QAGLPANVTVQVGQDAKFV------ 300

  Fly   242 EWCEAHSDS-GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGIN-------------- 291
              |:.:||: .::.|        |....|:...:||........|.::|:|              
Zfish   301 --CKVYSDAQPHIQW--------LQHYTKNGSRYGPDGLPYVRVLKTAGVNTTDKEIEVLYLPNV 355

  Fly   292 -----GSF-----------------LVRESESSPGQRSISLRY-EGRVYHYRI------------ 321
                 |.:                 .|..:|::|.:......| |..:|...:            
Zfish   356 TFEDAGEYTCLAGNSIGISYHTAWLTVHPAETNPIETDYPPDYVEIAIYCIGVFLIACMVVIVVV 420

  Fly   322 ------SEDPDGKVFVTQEA--KFNTLAELVHHHSVPHEGHGLI---TPLLYPAPKQNKPTVFPL 375
                  ::.||   |.:|.|  |......|....:|..:....:   |||:....:::.....|:
Zfish   421 CRMRTSAKKPD---FSSQPAVHKLTKQIPLRRQVTVSSDSSSSMSSSTPLVRITTRRSSAHDDPI 482

  Fly   376 S----PEPDEWEICRTDIMMKHKLGGGQYGEVY-------------EAVWKRYGNTVAVKTLKED 423
            .    ||...||..|..:.:...||.|.:|:|.             |||      |||||.||:|
Zfish   483 PEYDLPEDPRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAV------TVAVKMLKDD 541

  Fly   424 TMA--LKDFLEEAAIMKEM-KHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS--------- 476
            ...  |.|.:.|..:||.: :|.|::.|:|.||::.|.|:|.|:.|.|||.::||:         
Zfish   542 ATEKDLSDLVSEMEMMKMIGRHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 606

  Fly   477 -----AGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMR 536
                 ...|.|....|:....|:|.||.||.|:..|||||||||.||.::.::|:|||||||.:.
Zfish   607 YDIARVSDEPLTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTESNVMKIADFGLARDVH 671

  Fly   537 D-DTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLD 600
            : |.|......:.|:||.|||.|....::.:||||:||||:|||.|.|.||||.|.:.:::..|.
Zfish   672 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 736

  Fly   601 KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSAS 665
            :|:||::|..|..|:|.:|:.||...::.|||||.:...|:.:...::..|.::  |.|.....|
Zfish   737 EGHRMDKPANCTNELYMMMKDCWHAISSHRPTFKQLVEDLDRILTLATNEEYLD--LCAPVEQYS 799

  Fly   666 SSAPSTSGVATGG 678
            .|.|.|....:.|
Zfish   800 PSFPDTRSSCSSG 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 9/54 (17%)
SH2_ABL 268..363 CDD:198189 24/154 (16%)
PTKc_Abl 382..644 CDD:270645 113/292 (39%)
FABD 1584..1723 CDD:197885
fgfr2XP_068081038.1 Ig 56..148 CDD:472250
Ig strand B 82..86 CDD:409353
Ig strand E 114..118 CDD:409353
Ig strand F 128..133 CDD:409353
Ig strand G 141..144 CDD:409353
IgI_2_FGFR 177..271 CDD:409443 2/5 (40%)
Ig strand A 177..180 CDD:409443
Ig strand A' 188..193 CDD:409443
Ig strand B 197..205 CDD:409443
Ig strand C 211..216 CDD:409443
Ig strand C' 219..221 CDD:409443
Ig strand D 230..233 CDD:409443
Ig strand E 237..242 CDD:409443
Ig strand F 251..258 CDD:409443
Ig strand G 261..271 CDD:409443 2/5 (40%)
IgI_3_FGFR2 279..383 CDD:409444 18/126 (14%)
Ig strand A 279..282 CDD:409444 2/9 (22%)
Ig strand A' 286..290 CDD:409444 0/3 (0%)
Ig strand B 298..305 CDD:409444 1/14 (7%)
Ig strand C 309..316 CDD:409444 2/14 (14%)
Ig strand D 331..336 CDD:409444 0/4 (0%)
Ig strand E 348..353 CDD:409444 0/4 (0%)
Ig strand F 361..369 CDD:409444 1/7 (14%)
Ig strand G 372..380 CDD:409444 0/7 (0%)
PTKc_FGFR2 475..787 CDD:270679 116/317 (37%)
Blue background indicates that the domain is not in the aligned region.

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