DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and yrk

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001352482.1 Gene:yrk / 337571 ZFINID:ZDB-GENE-030131-9517 Length:528 Species:Danio rerio


Alignment Length:455 Identity:208/455 - (45%)
Similarity:289/455 - (63%) Gaps:17/455 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 PGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHS-DSGNVGWVPSNYVTP 263
            ||.......||:|||::.|..|:.||.:|||:..|:: |..|:|.||.| |:|..|::|||||.|
Zfish    68 PGLTGGGVTLFIALYEYDARTEDDLSFQKGEKFHIIN-NTEGDWWEARSLDTGKSGYIPSNYVAP 131

  Fly   264 LNSLEKHSWYHGPISRNAAE--YLLSSGINGSFLVRESESSPGQRSISLR----YEG-RVYHYRI 321
            ::|::...||.|.:.|..||  .|..:...|:||:||||::.|..|:|:|    .:| .|.||:|
Zfish   132 VDSIQAEEWYFGKMGRKDAERQLLAQNNPRGTFLIRESETTKGAYSLSIRDWDDAKGDHVKHYKI 196

  Fly   322 SEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSPE-PDEWEIC 385
            .:..:|..::|...:|:|:.:||.|::  ....||...|: .:.::..|.:..||.: .|.|||.
Zfish   197 RKLDNGGYYITTRTQFDTVQQLVEHYT--ERAAGLCCRLI-GSCRRGMPKLADLSVKTKDVWEIP 258

  Fly   386 RTDIMMKHKLGGGQYGEVYEAVWKRYGNT-VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLI 449
            |..:.:..|||.||:|||:..:|.  |.| |||||||..||:.:.||:||.|||.::|..||||.
Zfish   259 RESLQLIKKLGNGQFGEVWMGMWN--GTTKVAVKTLKPGTMSPEAFLDEAQIMKRLRHDKLVQLY 321

  Fly   450 GVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR 514
            .|.:.| |.||||||||.|:|||||:......|....|:.||.|||:||:|:|..|||||||.|.
Zfish   322 AVVSEE-PIYIITEFMSQGSLLDFLKDGDGRNLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAA 385

  Fly   515 NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEI 579
            |.||||..:.|:||||||||:.|:.|||..||||||||||||...|.||:.|||||:||:||.|:
Zfish   386 NILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTEL 450

  Fly   580 ATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMF 644
            .|.|..|||.::..:|..::::||||..|.|.|..:::||.|||:.|..:|.||:.:...||..|
Zfish   451 ITKGRVPYPGMNNREVLEQVERGYRMPCPQGSPASLHELMLQCWRKDPDERHTFEYLQSFLEDYF 515

  Fly   645  644
            Zfish   516  515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 27/54 (50%)
SH2_ABL 268..363 CDD:198189 33/101 (33%)
PTKc_Abl 382..644 CDD:270645 139/262 (53%)
FABD 1584..1723 CDD:197885
yrkNP_001352482.1 SH3 76..133 CDD:473055 28/57 (49%)
SH2 136..234 CDD:472789 32/99 (32%)
PTKc_Src_Fyn_like 266..513 CDD:271105 134/249 (54%)
Blue background indicates that the domain is not in the aligned region.

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