DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and Map3k20

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001385922.1 Gene:Map3k20 / 311743 RGDID:1561394 Length:802 Species:Rattus norvegicus


Alignment Length:839 Identity:183/839 - (21%)
Similarity:301/839 - (35%) Gaps:208/839 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 DIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVC 452
            |:......|||.:|.||.|.|......||||.|      || ..:||.|:..:.|.|::|..||.
  Rat    15 DLQFFENCGGGSFGSVYRAKWISQDKEVAVKKL------LK-IEKEAEILSVLSHRNVIQFYGVI 72

  Fly   453 TREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESR---NYIHRDLAAR 514
            ...|.:.|:||:.|.|:|.|::.|...|.:|...::..||.:|.||.||...   ..|||||.:|
  Rat    73 LEPPNYGIVTEYASLGSLYDYINSNRSEEMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSR 137

  Fly   515 NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEI 579
            |.::..:.::|:.|||.:|.....|:.:..|. ||  |.|||.:.....|...|.:::||:|||:
  Rat   138 NVVIAADGVLKICDFGASRFHNHTTHMSLVGT-FP--WMAPEVIQSLPVSETCDTYSYGVVLWEM 199

  Fly   580 ATYGMSPYPAID-LTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHM 643
            .|..: |:..:: |...:..::|..|:..|..||....:|:.|||:.||..||:||.|...||.|
  Rat   200 LTREV-PFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESM 263

  Fly   644 FQESSITEAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKK 708
            ..::::.:.....|:..|........:...:                  ......||...|.:|:
  Rat   264 SNDTNLPDQCNSFLHNKAEWRCEIEATLERL------------------KKLERDLSFKEQELKE 310

  Fly   709 G----LPGGQALTPNAHHNDPHQQQASTPM---SETGSTSTKLSTFSSQ---GKGNVQMRRTTNK 763
            .    ....|.||          :|::||:   .|.|:.:.:...|..|   |||          
  Rat   311 RERRLKMWEQKLT----------EQSNTPLLPSFEIGAWTEEDVYFWVQQLVGKG---------- 355

  Fly   764 QGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFI--DDLSTNGIHKLKTANYFSQTLSRNFKT 826
                      .:|:..|...|.::|.:....|...:  :||...||.......:|...:.:....
  Rat   356 ----------ESSVEMSGYASLFKENNITGKRLLLLEEEDLKDMGIVSKGHIIHFKSAIEKLTHD 410

  Fly   827 QIPTHHTHQIRTQQQQQQQSVQQQQQIVPLSVQQQAH------QQQQKQQQY-SIKKSSSCSSFL 884
            .:...|...:.....::.:  :.:::||.|.:....|      .|..|.:.| .:.......:::
  Rat   411 YLNLFHFPPLIKDSGEEPE--ENEEKIVNLELVFGFHLKPGTGPQDCKWKMYMEMDGDEVAIAYI 473

  Fly   885 YDILFRGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIA------APVTNKMQHSLH 943
            .|:.|.....|...|..     |.|....:....|...:|::...:.      .|...|..||:.
  Rat   474 KDVTFNTSLPDAEILKM-----TKPPFVMEKWIVGIVKDQTVECTVTYESDVRTPKFTKHVHSIQ 533

  Fly   944 --------------------SGGGGGGIGPRSSQ----------------QHSSFKRPTGTPVMG 972
                                .....|..|.||..                .|||.:|....|::|
  Rat   534 WDRAKPQDEVKAVQLAIQTLFSSSEGNPGSRSDSSADCQWLDTLRMRQIASHSSLQRSQSNPILG 598

  Fly   973 NRGLE--------------TRQSKRSQLHSQAPGPGPPSTQPHHGNNGVVTSAHPITVGALDVMN 1023
            :...:              |:...:.|..:.:..|...|:...:|.....:|.|         :|
  Rat   599 SPFFQYFVNQDSYAAAVRRTQTPVKYQQITPSINPSRSSSPTQYGLTKNFSSLH---------LN 654

  Fly  1024 VK-------------------QVVNRY-------GTLPKGARIGAYLDSLEDSSEAAPA----LP 1058
            .:                   :..|:|       .:.||| |.|........|.|..|.    ||
  Rat   655 SRDSGFSSLNDSSSERGRYSDRSRNKYYRGSVSLNSSPKG-RYGGKSQHSTPSRERYPGKFYRLP 718

  Fly  1059 ATAPSLPPANGHATP-----------------PAARLNPKASPIPPQQMIRSNSSGGVT 1100
            .:|     .|.|.:|                 |...|:|:.:|...::..|. |.||.|
  Rat   719 QSA-----LNTHQSPDFKRSPNDHDRRAPKTIPGMPLHPETAPKAGEEESRV-SEGGWT 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189
PTKc_Abl 382..644 CDD:270645 90/259 (35%)
FABD 1584..1723 CDD:197885
Map3k20NP_001385922.1 STKc_MLTK 22..263 CDD:270962 89/251 (35%)
SAM_MLTK 338..408 CDD:188928 15/89 (17%)
Blue background indicates that the domain is not in the aligned region.

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