DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and svh-2

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_509104.1 Gene:svh-2 / 180929 WormBaseID:WBGene00020504 Length:1086 Species:Caenorhabditis elegans


Alignment Length:361 Identity:118/361 - (32%)
Similarity:184/361 - (50%) Gaps:40/361 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 SPEPD---EWEICRTDIMMKHKLGGGQYGEVYEAVW---KRYGNTVAVKTLKEDTMALKDFLEEA 434
            |..||   :::..|.|.:  ..:|.|.||.||:|::   |.....|..|.|||.  .:.:|.|||
 Worm   721 SMRPDLKVDFKNLRVDKL--DPIGQGHYGVVYKAMYSPSKSLEEKVVCKYLKEG--KISEFYEEA 781

  Fly   435 AIMKEMKHPNLVQLIGVCTREPPF--YIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASG 497
            ..|.|..|||:::||||...:...  .||||:|:.|:|..|:.:. ..|:....|...|..||.|
 Worm   782 RTMSEFDHPNILKLIGVALDDSSHLPIIITEYMAKGDLKSFIENV-ENTIKMRDLFEFAFDIAKG 845

  Fly   498 MSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDT--YTAHAGAKFPIKWTAPEGLAY 560
            |:|:.|:.:||||||.||||:.::..||:|||||.|.:..:|  |........|::|..|| ::.
 Worm   846 MNYMHSKKFIHRDLACRNCLLDEHLRVKIADFGLCRKVDIETELYVQMHERDLPVRWFPPE-ISE 909

  Fly   561 NKFSTKSDVWAFGVLLWEIATYGMSPYPAID---LTDVYHKLDKGYRMERPPGCPPEVY-DLMRQ 621
            ..|...||:|:|||::||:.|.|.:||..:.   |...:.|..:..|:.:||.||.::| |:|..
 Worm   910 QGFGITSDIWSFGVVIWELFTRGSTPYSNMASWILILPWLKESETNRLRKPPYCPEKLYTDVMLA 974

  Fly   622 CWQWDATDRPTFKS----IHHALEHM--FQESSITEAVEKQLNANATSAS----------SSAPS 670
            ||:.:..:||.|..    |.:.:::|  :..|.:....|: :::...|.|          :..|:
 Worm   975 CWKANPAERPQFSDLVTIIPNVVKYMEGYDRSQLQAGYER-VSSRFLSLSRHDPAFPIYQNEMPN 1038

  Fly   671 TSGVATGGGATT---TTAASGCASSSSATASLSLTP 703
            |..:|.....|.   |.|.....|.|::||....||
 Worm  1039 TPLLANCQNDTNDSKTLAELPSDSPSTSTAIPQSTP 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189
PTKc_Abl 382..644 CDD:270645 99/278 (36%)
FABD 1584..1723 CDD:197885
svh-2NP_509104.1 TyrKc 735..993 CDD:197581 96/263 (37%)
Blue background indicates that the domain is not in the aligned region.

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