DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and kin-26

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_501309.1 Gene:kin-26 / 177575 WormBaseID:WBGene00002208 Length:433 Species:Caenorhabditis elegans


Alignment Length:436 Identity:134/436 - (30%)
Similarity:204/436 - (46%) Gaps:52/436 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 SLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQ---RSISLRYEGR------VYHYRI 321
            :::|..:|||.:.......|||:  ||.||:|.||..||.   ..:|:.:..|      :.|: :
 Worm    14 TIDKELYYHGLLPSEDVRQLLSN--NGDFLLRSSEPEPGSPRTHILSVMFNNRLDDINSIKHF-V 75

  Fly   322 SEDPDGKVFVTQEAKFNTLAELV----HHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEW 382
            ....|||.|:..:..|.::.:::    .:::...||..|:.|:                 ....|
 Worm    76 VNFVDGKYFINDKMSFPSIQKMLGTYQRNNTEIKEGCMLVNPI-----------------RRQFW 123

  Fly   383 EICRTDIMMKHKLGGGQYGEVYEAVWK-RYGN---TVAVKTLKEDTMA---LKDFLEEAAIMKEM 440
            |:....|.:..|||.|.:|||...|.| :.|.   .||:|.:|.|...   :||||.||..|:::
 Worm   124 ELEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRKL 188

  Fly   441 KHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRN 505
            .|.|:::..||...:.|.|::.|...:|.|..||:.  .|.|.......|..|.|.|:.|:..:.
 Worm   189 GHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKK--NEDLSVDKKTEMILQAAWGLEYIHGKP 251

  Fly   506 YIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVW 570
            .:|||:||||||..|.| ||::||||.|  ....|......|.||:|.|.|.:.....|.|:|||
 Worm   252 MLHRDIAARNCLYTDGK-VKISDFGLTR--NGTVYQIKPNTKSPIRWLAIETIKTMICSEKTDVW 313

  Fly   571 AFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKS 635
            |:|||.|||......|||.:...||..::..||||...|....|:..:|.:|...:..|||:...
 Worm   314 AYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPYPHAQAEIQTMMARCNAENPNDRPSMAE 378

  Fly   636 IHHALEHM-------FQESSITEAVEKQLNANATSASSSAPSTSGV 674
            |...|:.:       |...:..||.|..|..:.|:.:::....|.|
 Worm   379 IAEILQRVTETPRPNFTAIAKKEAEELLLMNSVTTKTTARRKKSNV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784
SH2_ABL 268..363 CDD:198189 28/107 (26%)
PTKc_Abl 382..644 CDD:270645 98/275 (36%)
FABD 1584..1723 CDD:197885
kin-26NP_501309.1 SH2_Fps_family 15..108 CDD:198224 24/95 (25%)
TyrKc 130..383 CDD:197581 95/257 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.