DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abl and Lyn

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001104566.1 Gene:Lyn / 17096 MGIID:96892 Length:512 Species:Mus musculus


Alignment Length:479 Identity:206/479 - (43%)
Similarity:287/479 - (59%) Gaps:38/479 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 LAPG-------PEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHS-DSGNVG 254
            |.||       |||.. .:.||||.:.....:.||.||||::::|  .:.|||.:|.| .|...|
Mouse    50 LLPGQRFQTKDPEEQG-DIVVALYPYDGIHPDDLSFKKGEKMKVL--EEHGEWWKAKSLSSKREG 111

  Fly   255 WVPSNYVTPLNSLEKHSWYHGPISRNAAE-YLLSSGIN-GSFLVRESESSPGQRSISLR-YEGR- 315
            ::|||||..:|:||...|:...|:|..|| .||:.|.: |:||:||||:..|..|:|:| |:.. 
Mouse   112 FIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMH 176

  Fly   316 ---VYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSP 377
               :.||:|....:|..:::....|..:::::.|:....:|..........:||..||.      
Mouse   177 GDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPW------ 235

  Fly   378 EPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT---VAVKTLKEDTMALKDFLEEAAIMKE 439
            :.|.|||.|..|.:..|||.||:||    ||..|.|.   |||||||..||:::.|||||.:||.
Mouse   236 DKDAWEIPRESIKLVKKLGAGQFGE----VWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKT 296

  Fly   440 MKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS--AGRETLDAVALLYMATQIASGMSYLE 502
            ::|..||:|..|.|:|.|.|||||||:.|:|||||:|  .|:..|.  .|:..:.|||.||:|:|
Mouse   297 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE 359

  Fly   503 SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKS 567
            .:|||||||.|.|.||.::.:.|:|||||||::.|:.|||..||||||||||||.:.:..|:.||
Mouse   360 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 424

  Fly   568 DVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPT 632
            |||:||:||:||.|||..|||.....||...|.:||||.|...||.|:||:|:.||:..|.:|||
Mouse   425 DVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPT 489

  Fly   633 FKSIHHALEHMFQESSITEAVEKQ 656
            |..:...|:..:   :.||...:|
Mouse   490 FDYLQSVLDDFY---TATEGQYQQ 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 23/54 (43%)
SH2_ABL 268..363 CDD:198189 28/101 (28%)
PTKc_Abl 382..644 CDD:270645 139/266 (52%)
FABD 1584..1723 CDD:197885
LynNP_001104566.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
SH3_Lyn 67..122 CDD:212937 23/56 (41%)
SH2_Src_Lyn 125..225 CDD:198227 28/99 (28%)
PTKc_Lyn 239..510 CDD:270657 141/279 (51%)
Blue background indicates that the domain is not in the aligned region.

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