DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and LOC100496572

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_001415012.1 Gene:LOC100496572 / 100496572 XenbaseID:XB-GENE-29083231 Length:1368 Species:Xenopus tropicalis


Alignment Length:775 Identity:203/775 - (26%)
Similarity:304/775 - (39%) Gaps:211/775 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SGAP------VSCIGLS--SSPVASVSPHCISSSSGVSSAPLGGGS--TLRGSRIKSSSSGVASG 72
            :|.|      :|..|.:  ...:.|:.|         :..||.||:  ||:|..::|..:.....
 Frog   639 TGTPYYIKGTISAAGFNFVEPAITSIEP---------NFGPLAGGTMLTLKGQNLRSGETQRVFI 694

  Fly    73 SGSGGGGGGSGSG------LSQRSGGHKDARCNPTVG-LNIFTEHNGTKHSSFRGHPGKYHMNLE 130
            ||:.....||...      :|.||         .::| ||:....:|.:.||    |.::     
 Frog   695 SGAECMISGSLCPAEVLCCVSPRS---------LSLGPLNVSALLDGAEISS----PAQF----- 741

  Fly   131 ALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLGLQGSSLGG------GHSSTTSVFESAH 189
               |.:|.|.:.......||.:...           |.:|||:|..      .:|...:|.....
 Frog   742 ---QYKPDPLVSVIRPNCSLASGTR-----------LTIQGSNLDSVSSIKISYSGQKTVSSDCQ 792

  Fly   190 RWTSKENLLAPGPEED------------DPQLFVALYDFQ---------------AGGENQLSLK 227
            ...|.:.::...||..            |...::..|.|:               .||  .|.||
 Frog   793 GTFSSDRIVCRSPEYPYFGRPGNLTLALDAVNYIYPYRFRYLQNYVIHPFRPKDPDGG--ILKLK 855

  Fly   228 KG-----------EQVRI---LSYNKSGEWCEAHSDSGNVGW-VPSNYVTP-------------- 263
            ||           |||..   :|....|..|........:.. :|...|.|              
 Frog   856 KGEDEIETHQENLEQVATCLKVSMTVGGRECNPTVLKNEITCRIPKGMVIPSEGSIVQVCVDDDC 920

  Fly   264 --------LNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV----RESESSPGQRSISLRYEGR- 315
                    :|.|:.   ..|.:..:.|..|:.:.:  .||:    |:.:..|...::.|..... 
 Frog   921 TTVGLVMIVNMLDP---VLGIVLGSVASVLVVAVL--IFLLLKHQRKKKKKPAVEALELLSNNNR 980

  Fly   316 --------VYH--YRISEDPDGKVFVTQEAKFNTLAELVH--HHSVPHEGHG----LITPLLYPA 364
                    :.|  ||.|..|..          |:...|.|  .:|....|.|    |:|.||...
 Frog   981 EPVLSPISLLHVDYRTSYIPSS----------NSGGMLSHGAGYSGGSLGGGSMPILLTSLLDSL 1035

  Fly   365 P----KQNKPTVFPLSPEPDEWEICRTDIMMKHK---LGGGQYGEVYEAVWKRYGNTV------- 415
            .    ::.|..:.|        |.|.|    .|:   :|.|.:|.||      :|..|       
 Frog  1036 RPELLEEVKDVLIP--------ERCLT----THRDRIIGKGHFGSVY------HGTYVDEDQQEV 1082

  Fly   416 --AVKTLKE--DTMALKDFLEEAAIMKEMKHPNLVQLIGV-CTREPPFYIITEFMSHGNLLDFLR 475
              |||:|..  |...:::||.|..:||...|||::.|||: ..:|....::..||.||:|..|:|
 Frog  1083 HCAVKSLNRITDLEEVEEFLREGILMKSFHHPNVLSLIGIFLPQEGLPLVVLPFMKHGDLRHFIR 1147

  Fly   476 SAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTY 540
            ...|.. ....|:....|::.||.||.:|.::|||||||||::.:...||||||||||.:.|..|
 Frog  1148 CQERNP-TVKDLVGFGLQVSRGMEYLANRKFVHRDLAARNCMLDETFHVKVADFGLARDVFDKEY 1211

  Fly   541 TA---HAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKG 602
            .:   |..|:.|:||.|.|.|...||:||||||:|||||||:.|.|..|||.:|..|:...|.:|
 Frog  1212 YSVRRHKNARLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDPYDITRYLFRG 1276

  Fly   603 YRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANAT 662
            .|:.:|..||..:|.||..||.....:||||..:...:|.:    |.:...:..:|.|.|
 Frog  1277 RRLAQPEYCPDPLYSLMLSCWNPQPEERPTFTQLVGDMEVI----SNSLCGDHYINLNVT 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 17/83 (20%)
SH2_ABL 268..363 CDD:198189 23/115 (20%)
PTKc_Abl 382..644 CDD:270645 110/279 (39%)
FABD 1584..1723 CDD:197885
LOC100496572NP_001415012.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.