DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and abl1

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:XP_002936228.2 Gene:abl1 / 100490771 XenbaseID:XB-GENE-6054675 Length:1128 Species:Xenopus tropicalis


Alignment Length:1248 Identity:499/1248 - (39%)
Similarity:640/1248 - (51%) Gaps:273/1248 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LGLQGSSLGGGHSSTTSVF------------------ESAHRWTSKENLLAPGPEEDDPQLFVAL 213
            |.|.|.....|.||::|.:                  ..|.||.||||||: ||.|:||.|||||
 Frog    33 LKLVGCKSKKGLSSSSSCYLEEALQRPTVSDIEPQGLSEAARWNSKENLLS-GPSENDPNLFVAL 96

  Fly   214 YDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKHSWYHGPIS 278
            |||.|.|:|.||:.|||::|:|.||.:||||||.:.:|. |||||||:||:||.|||||||||:|
 Frog    97 YDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYITPVNSPEKHSWYHGPVS 160

  Fly   279 RNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAEL 343
            |||||||||||||||||||||||||||||||||||||||||||:...|||::|:.:::|||||||
 Frog   161 RNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSDSRFNTLAEL 225

  Fly   344 VHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVW 408
            |||||...:  ||||.|.|||||:||||::.:||..|:|||.||||.|||||||||||||||.||
 Frog   226 VHHHSTVSD--GLITTLHYPAPKRNKPTIYGVSPNYDKWEIERTDITMKHKLGGGQYGEVYEGVW 288

  Fly   409 KRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDF 473
            |:|..||||||||||||.:::||:|||:|||:||||||||:||||||||||||||||::|||||:
 Frog   289 KKYNLTVAVKTLKEDTMEVEEFLKEAAVMKEVKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 353

  Fly   474 LRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDD 538
            ||...|:.:.||.||:|||||:|.|.|||.:|:|||||||||||||:|.|||||||||:|||..|
 Frog   354 LRDCNRQEVTAVVLLHMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 418

  Fly   539 TYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGY 603
            ||||||||||||||||||.|||||||.|||||||||||||||||||||||.|||:.||..|:|.|
 Frog   419 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 483

  Fly   604 RMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSS- 667
            |||||.|||.:||:|||:||||...|||:|..||...|.|||||||::.|||:|.......:.| 
 Frog   484 RMERPEGCPEKVYELMRECWQWSPLDRPSFAEIHQDFETMFQESSISDEVEKELGKKGLKVTVSN 548

  Fly   668 ---APS-------TSGVATGGGATTTTAASGCASSSSA-TASLSLTPQMVKKGLPGGQALTPNAH 721
               ||.       |..|.........||:...|..... ....:::|.:.:|....|..:.|:..
 Frog   549 LLQAPELPTKTRITRRVPESKDENAETASVRAAGELDVFEPESAVSPLLPRKERGAGDGVLPDDD 613

  Fly   722 HNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQAPAPPKRTSLL-----SSS 781
            ...|..::          |:...||...:.|             |.||.||||:|..     .|.
 Frog   614 RLLPKDKK----------TNLFFSTLIKRKK-------------KNAPTPPKRSSSFRDMEGHSE 655

  Fly   782 RDSTYREEDPANARCNFID--DLSTNGIHKLKTANYFSQT--LSRNFKTQIPTHHTHQIRTQQQQ 842
            |.||..|...||.. :.:|  .|||||. .|...:....|  ||..:|..          :....
 Frog   656 RRSTDGEGKEANGG-DLLDTFKLSTNGT-ALSNGSIQGSTGFLSSQWKKS----------STMTG 708

  Fly   843 QQQSVQQQQQIVPLSVQQQAHQQQQKQQQYSIKKSSSCSSF-LYDILFRG--LARDINS------ 898
            :|.|..:::.|...|            :::....|:||... ..|..::.  |.|:|.|      
 Frog   709 RQASPSEEETICSTS------------KRFLRSCSASCMPHGAKDTEWKSVTLPREITSSRCLLD 761

  Fly   899 --------------LTQRYDSETDP----------------AADP------DTDATGDSLEQSLS 927
                          |.::..:|:.|                ..||      |.|.:.:|...||:
 Frog   762 TPGSDSLKKAEKPALPRKRGNESKPEGTRGTVTPPPRLPKKCEDPNDEVFKDADPSPNSSPPSLT 826

  Fly   928 QVI---------AAPVTNKMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKR 983
            ..:         .||:..:...::..|......||.:.|          |...|....|.|..: 
 Frog   827 PKLLRRKPAGPAGAPLQKEEASNIRLGSVNSDTGPSTKQ----------TSFAGKSEAELRLRR- 880

  Fly   984 SQLHSQAPGPGPPSTQPHHGNNGVVTSAHPITVGALDVMNVKQVVNRYGTLPKGARIGAYLDSLE 1048
                        |.|            :.|.|...:.|:.||.    ...||        |.|:.
 Frog   881 ------------PKT------------SEPATKDKVKVLKVKP----SPPLP--------LSSIG 909

  Fly  1049 DSSEAAPALPATAPSLPPANGHATPPAARLNPK---------ASPIPPQQMIRSNSSGGVTMQNN 1104
            .|..|:..|...|.  ||:..|.|.|:   .||         .|..||.  :..:|...|.:.::
 Frog   910 SSPSASSNLGKAAK--PPSQSHDTSPS---EPKHKLTSQTDELSKTPPP--VPDSSKKPVLLSSS 967

  Fly  1105 AAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSASGVASGVQPALA---NLEFPPPPLDLP 1166
            ......||       .|.|:      |||..|.|...:|..::...|.::   :|.      ...
 Frog   968 KPQVTGKL-------SGGMV------AGGDQSQPSAPSSSSSTAFVPLISTRVSLR------KTR 1013

  Fly  1167 PPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNIAPSVEEAS 1231
            .|||:...      |..:..|.|..:.|.|.:..|         :...:||:.|...|.::..  
 Frog  1014 QPPEKHSS------PVTKETVMASTECLKAAIARN---------SEQMASHSTVLEAAKNLHA-- 1061

  Fly  1232 SRFGVSLRKREPSTDSCSSLGSPPEDLKEKL-----ITEIKAAGKD----TAPASHLANGSGIAV 1287
                           .|:|.....:.::.|.     |::::.:.:|    .|||   |.|.|.|.
 Frog  1062 ---------------FCTSYVDSIQQMRNKFAFREAISKLENSLRDLQICPAPA---AAGGGAAT 1108

  Fly  1288 VDPVSLLVTELAE 1300
            ....|.|:|.:.|
 Frog  1109 SQDFSKLLTSVKE 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 34/53 (64%)
SH2_ABL 268..363 CDD:198189 74/94 (79%)
PTKc_Abl 382..644 CDD:270645 200/261 (77%)
FABD 1584..1723 CDD:197885
abl1XP_002936228.2 SH3_Abl 92..145 CDD:212784 34/53 (64%)
SH2_ABL 150..243 CDD:198189 74/94 (79%)
PTKc_Abl 262..524 CDD:270645 200/261 (77%)
F_actin_bind 1003..1128 CDD:471692 30/160 (19%)
Blue background indicates that the domain is not in the aligned region.

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