DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment onecut and Onecut1

DIOPT Version :9

Sequence 1:NP_001259065.1 Gene:onecut / 45816 FlyBaseID:FBgn0028996 Length:1081 Species:Drosophila melanogaster
Sequence 2:NP_032288.1 Gene:Onecut1 / 15379 MGIID:1196423 Length:465 Species:Mus musculus


Alignment Length:808 Identity:225/808 - (27%)
Similarity:293/808 - (36%) Gaps:382/808 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 EISSDGVGCDDEGVTLSHQHLLEQEEQFGLTSH------H--PHLQPHTQIIHGLHQRSTHSEMG 259
            :::.:.:| :..||  ||:.:....:..|.:.|      |  .||.|       .|.||......
Mouse     4 QLTMEAIG-ELHGV--SHEPVPAPADLLGGSPHARSSVGHRGSHLPP-------AHPRSMGMASL 58

  Fly   260 LDNGHGEVLSVIVHSQDSDKEDCEENDDGDAEGDLENEDDDERDSRSREQLLSHSSYQTLTSVND 324
            ||.|.|                               ..|.....|:.|..|:...:.|:|...:
Mouse    59 LDGGSG-------------------------------GSDYHHHHRAPEHSLAGPLHPTMTMACE 92

  Fly   325 RLSSPGFSQ-TSYATLTPIQPLPPISTMSEKFAYSGH-------------ISGGDSGDTDVNGDG 375
              :.||.|. |:|.||||:||||||||:|:||.:..|             ::|..||...:..|.
Mouse    93 --TPPGMSMPTTYTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDE 155

  Fly   376 AGGGVVEVGEVTNQSSEATGTVSISSGNATSSVCSNNDCSSFSALSMPIGSGHLGLGVLSGVQSP 440
            .|                                    .:|.:.|..|......|:|     || 
Mouse   156 RG------------------------------------LASMNNLYTPYHKDVAGMG-----QS- 178

  Fly   441 FSSYEKLSSMISPPPNNYLVSCDLHSSVSGRVINSSHLQLSHNGNKKESGTHEHTHRPADVNGGK 505
                      :||...:.|.|  :|:|..|         |.|..:   .|....|.:....||.:
Mouse   179 ----------LSPLSGSGLGS--IHNSQQG---------LPHYAH---PGAAMPTDKMLTPNGFE 219

  Fly   506 FSYTGHISRGDSVDNDVNGEKFSFSDHISGGDSGDEDANREKFIYSDHISEGENGPDVNSGTNWL 570
            ..:...:.|                                                        
Mouse   220 AHHPAMLGR-------------------------------------------------------- 228

  Fly   571 QMHSEREVRLHMPVPAELEARFHISSERRTRLNVPPARGSLSRHLAPNAPICPADWKADDWKHSN 635
              |.|                                     :||.|                ::
Mouse   229 --HGE-------------------------------------QHLTP----------------TS 238

  Fly   636 AGVVSLTADMPVVVSLTPTPPPLRDDSVSGIKQNERSSPGHREQYFLDKSQEPSSVVADQCSPGI 700
            ||:|.:.       .|.|..|           ....::.||.:  .|..::||            
Mouse   239 AGMVPIN-------GLPPHHP-----------HAHLNAQGHGQ--LLGTAREP------------ 271

  Fly   701 NGTPQSVCVIHQQSPSALGNGFQSSSQQAKVSSCASPKGTVSSGGAVSNRIANSSDMEEINTKDL 765
                         :||..|                   ..||:|       :||..|||||||::
Mouse   272 -------------NPSVTG-------------------AQVSNG-------SNSGQMEEINTKEV 297

  Fly   766 AQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWLQEPEFQRM 830
            ||||:.|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||
Mouse   298 AQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRM 362

  Fly   831 SALRMAAAQIPQRAPLSSGMSLGSATGPSGSTGTIPTDLDPHGGPTMIQNPLTNESDSSPASTPV 895
            ||||:||                                                          
Mouse   363 SALRLAA---------------------------------------------------------- 369

  Fly   896 TSVLVGSVVSCRRKE-EPQIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGL 959
                      |:||| |...::...||||||||||:|||||.|||||.||||||:|:||::||||
Mouse   370 ----------CKRKEQEHGKDRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGL 424

  Fly   960 EPTTVGNFFMNARRRSMDKWRDDDSKST 987
            |.:||.||||||||||:|||:|:...::
Mouse   425 ELSTVSNFFMNARRRSLDKWQDEGGSNS 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
onecutNP_001259065.1 CUT 756..830 CDD:280527 67/73 (92%)
HOX 920..975 CDD:197696 44/54 (81%)
Onecut1NP_032288.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..84 21/108 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..141 4/21 (19%)
CUT 288..362 CDD:308148 67/73 (92%)
HOX 385..440 CDD:197696 44/54 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..465 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835044
Domainoid 1 1.000 148 1.000 Domainoid score I4442
eggNOG 1 0.900 - - E1_KOG2252
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001166
OrthoInspector 1 1.000 - - otm43997
orthoMCL 1 0.900 - - OOG6_110183
Panther 1 1.100 - - O PTHR14057
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3544
SonicParanoid 1 1.000 - - X793
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.730

Return to query results.
Submit another query.