DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn27A and Spn43Ab

DIOPT Version :10

Sequence 1:NP_652024.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:388 Identity:99/388 - (25%)
Similarity:176/388 - (45%) Gaps:56/388 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 HLLKTVLQNETA----DKNVIISPFSVKLVLALLAEAAGAGTQTQVE----LANTQTDIRSQNNV 135
            :||...|.|..|    ::||:|||.:::..:||....|...|.::::    |.....|..||.: 
  Fly    30 NLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRS- 93

  Fly   136 REFYRKTL---NSFKKENQLH--ETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNP- 194
             ..|::.|   |:|:..|.::  |.|.     |..||.:..|:       .:||.::.|||..| 
  Fly    94 -GSYQQALTRDNNFRLANNIYINENLE-----FKGSFRDVAQR-------QFDSNIDKLDFHPPY 145

  Fly   195 -EAAADAINAWAANITQGRLQQLVAPD--NVRSSVMLLTNLIYFNGLWRRQFA--TTFQGSFFRS 254
             :..||.||...|..|.|::..::..:  |.|:..::: |.:.::..|::.|.  .|.:.||...
  Fly   146 NKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIV-NGVSYSAAWQKAFRLDKTEKRSFRTG 209

  Fly   255 KDDQSRAEFMEQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKS 318
            .....:.:.|.....|.|.....|.|:::.|||:..: |:.:|||...:|:..|.::|....|.:
  Fly   210 SGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLA 274

  Fly   319 AQWAMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVK------V 377
            ...||.:.||:|.||||...:...|:...:.|||..:|         :|..|.....:      :
  Fly   275 EIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMF---------SRDGDFGNMYRMFVSHFI 330

  Fly   378 SNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKV 440
            :.:..||.:.|.|.|.:....|.: ::..|..|   ::|..:.||||.|:.:.  :|.|.|.:
  Fly   331 NAVEHKANVEVTEAGVDQPLETGL-LKGLFSRS---KKFEADHPFVFAIKYKD--SIAFIGHI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_652024.1 serpinK_insect_SRPN2-like 64..443 CDD:381044 99/388 (26%)
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 99/388 (26%)

Return to query results.
Submit another query.