DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Spn43Ab

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:388 Identity:99/388 - (25%)
Similarity:176/388 - (45%) Gaps:56/388 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 HLLKTVLQNETA----DKNVIISPFSVKLVLALLAEAAGAGTQTQVE----LANTQTDIRSQNNV 135
            :||...|.|..|    ::||:|||.:::..:||....|...|.::::    |.....|..||.: 
  Fly    30 NLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRS- 93

  Fly   136 REFYRKTL---NSFKKENQLH--ETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNP- 194
             ..|::.|   |:|:..|.::  |.|.     |..||.:..|:       .:||.::.|||..| 
  Fly    94 -GSYQQALTRDNNFRLANNIYINENLE-----FKGSFRDVAQR-------QFDSNIDKLDFHPPY 145

  Fly   195 -EAAADAINAWAANITQGRLQQLVAPD--NVRSSVMLLTNLIYFNGLWRRQFA--TTFQGSFFRS 254
             :..||.||...|..|.|::..::..:  |.|:..::: |.:.::..|::.|.  .|.:.||...
  Fly   146 NKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIV-NGVSYSAAWQKAFRLDKTEKRSFRTG 209

  Fly   255 KDDQSRAEFMEQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKS 318
            .....:.:.|.....|.|.....|.|:::.|||:..: |:.:|||...:|:..|.::|....|.:
  Fly   210 SGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLA 274

  Fly   319 AQWAMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVK------V 377
            ...||.:.||:|.||||...:...|:...:.|||..:|         :|..|.....:      :
  Fly   275 EIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMF---------SRDGDFGNMYRMFVSHFI 330

  Fly   378 SNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKV 440
            :.:..||.:.|.|.|.:....|.: ::..|..|   ::|..:.||||.|:.:.  :|.|.|.:
  Fly   331 NAVEHKANVEVTEAGVDQPLETGL-LKGLFSRS---KKFEADHPFVFAIKYKD--SIAFIGHI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 99/386 (26%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 99/386 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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