DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpinb3d

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:384 Identity:107/384 - (27%)
Similarity:194/384 - (50%) Gaps:30/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQV-----------ELANTQTDIRSQNN 134
            |:...|...:|.|:..||.|:...||:|...|.|.|:.|:           :......:...:.|
Mouse    13 LELYRQLRESDNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHFNETTKKTTEKSAESHDEEN 77

  Fly   135 VREFYRKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTN-PEAAA 198
            |.:.::..:....|.|..:: |.|...::........|.|...::.:|.:.||:|||.: .|.:.
Mouse    78 VHQQFQMLMTQLNKFNNAYD-LKVPNSIYGAKDFPFLQTFLKDIRKYYQANVESLDFAHAAEESQ 141

  Fly   199 DAINAWAANITQGRLQQLVAPDNVRSS-VMLLTNLIYFNGLWRRQF--ATTFQGSFFRSKDDQSR 260
            ..||:|.|..|.|:::.|....::.|| :::|.|.:||.|.|..:|  ..|.:..|:.:|:....
Mouse   142 KKINSWMARQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFDEKHTREEKFWLNKNTSKP 206

  Fly   261 AEFMEQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKSAQWA-- 322
            .:.|:|.:.|.:...|.::|:|:.:|||||. |:|||||..::|:....:.|..|:|  .||.  
Mouse   207 VQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKKFEEQLTADKL--LQWTRA 269

  Fly   323 --MEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFE-DSASLPGLTRGADVAGKVKVSNILQKA 384
              |...::.::||:|..:.:.:|:..|..:|:.:.|: ..|...|::....:.    ||.:|.|:
Mouse   270 ENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSGMSNSQGLV----VSKVLHKS 330

  Fly   385 GINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKVHSP 443
            .:.|||:|.|  |||.:.:|::........:|:.|.||:|.:::..|.:|||.|:|.||
Mouse   331 FVEVNEEGAE--AATAMSVESRSLSVPKPNDFSCNHPFLFVMKQNKTNSILFFGRVSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 104/379 (27%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 105/382 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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