DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpinb3c

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_958751.2 Gene:Serpinb3c / 381286 MGIID:1277952 Length:386 Species:Mus musculus


Alignment Length:381 Identity:113/381 - (29%)
Similarity:188/381 - (49%) Gaps:35/381 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVE---LANTQTD--------IRSQNNVREFY 139
            |...:|||:..||.|:...|.:|...|...|:.|:|   ..|..|:        ...::||.|.:
Mouse    18 QLRESDKNIFYSPISMITALGMLKLGAKGNTEIQIEKVLQCNETTEKTTEKSAHCDDEDNVHEQF 82

  Fly   140 RKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTN-PEAAADAINA 203
            :|.:....|.|..:: |.....::........|.|...:|.:|.:.||:|||.: .|.:...||.
Mouse    83 QKLITQLNKSNDDYD-LKAANSIYGAKGFPLLQTFLEDIKEYYHANVESLDFEHAAEESEKKINF 146

  Fly   204 WAANITQGRLQQLVAPDNVRSSV-MLLTNLIYFNGLWRRQF--ATTFQGSFFRSKDDQSRAEFME 265
            |..|.|.|:::.|....::.||. ::|.|.:||.|.|..:|  ..|.:..|:.:|:.......|:
Mouse   147 WVKNETNGKIKDLFPSGSLSSSTKLVLVNAVYFKGRWNHKFDENNTIEEMFWLNKNTSIPVPMMK 211

  Fly   266 QTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKSAQWAMEE---- 325
            |.:.|.::..|.::|||:.:|||||. |:|||||..::|:..|.|.|  ...|..:|...|    
Mouse   212 QRNKFMFSFLEDVQAQIVEIPYKGKELSMFVLLPMEIDGLKQLEKQL--TAAKLLEWTRAENMHL 274

  Fly   326 VKVKVTLPKFHFDYQQNLKETLRSLGVREIFE-DSASLPGL--TRGADVAGKVKVSNILQKAGIN 387
            .::.:.||:|..:.:.:|...|..:|:...|: ..|...|:  |:|      :.||.:|.|:.:.
Mouse   275 TELYLWLPRFKVEEKYDLPVPLECMGMVNAFDPQKADFSGMSSTQG------LVVSKVLHKSFVE 333

  Fly   388 VNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKVHSP 443
            |||:||||..|:..|:..:.   ..:.:|..:.||:|||....|.:|||.|::.||
Mouse   334 VNEEGTEADPASGEEVILRL---AQVADFRCDHPFLFFIIHSKTNSILFFGRISSP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 111/376 (30%)
Serpinb3cNP_958751.2 SERPIN 6..386 CDD:294093 111/379 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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