DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Spn43Ad

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster


Alignment Length:385 Identity:88/385 - (22%)
Similarity:161/385 - (41%) Gaps:48/385 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LKTVLQNETADKNVIISPFSVKLVLALL-AEAAGA-GTQTQVELANTQTDIRSQNNVREFYRKTL 143
            |.|.|.....|.||::||..::..|:|| ||::.. |:|.:..|..|... ..:..|::|  :||
  Fly    43 LTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHAS-HPKLAVQDF--ETL 104

  Fly   144 NSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDS-------EVEALDFTNPEAAADAI 201
            .:..|::   ..:..|.:|.:|.:  .||:||...::.:::       ....|.:.:...||..|
  Fly   105 LTDLKQS---AAIGCRLRLLSDLY--AQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDI 164

  Fly   202 NAWAANITQGRLQQLVAPDNVRSSVMLLTNLIYFNGL-WRRQFATTFQG------SFFRSKDDQS 259
            |....:.:...|.:||:...:.|.....|..::.:|: :|..:|..|..      :||...:...
  Fly   165 NYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPR 229

  Fly   260 RAEFMEQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKSAQWAM 323
            ..:.|.....:.|.....|.||::.:|:...: .:.::.|...:|:..|.:.|...:|...:..:
  Fly   230 LVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQL 294

  Fly   324 EEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPG-----LTRGADVAGKVKVSNILQK 383
            ||.||.:||||.......:||..|..||:.::|.....|..     |:..|...|.|..|.:|: 
  Fly   295 EERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLE- 358

  Fly   384 AGINVNEKGTEAYAATVVEIENKFGGSTAIEE---FNVNRPFVFFIEEESTGNILFAGKV 440
                :.|.|..|        ::.|........   ..:|.||.:.|....|  :|.:|.:
  Fly   359 ----LQEDGGNA--------DDSFSFGDLFRRALPLVINHPFFYAIGNGKT--LLLSGHI 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 88/383 (23%)
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 88/383 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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