DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn27A and serpina1

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_017207927.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:433 Species:Danio rerio


Alignment Length:399 Identity:120/399 - (30%)
Similarity:193/399 - (48%) Gaps:28/399 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PSGAGIYDDIDTFVPFRSDSHDPFSWHLLKTVLQN-ETADKNVIISPFSVKLVLALLAEAAGAGT 116
            ||..|: |......|..:|    |::.|.|.:..| :...||:..||..:.:.|:|||..|.|.|
Zfish    55 PSHKGV-DACHLLAPHNAD----FAFSLYKKLASNPDGQGKNIFFSPVGISMALSLLAVGAKAST 114

  Fly   117 QTQVELANTQTDIRSQNNVREFYRKTLNSF---KKENQLHETLSVRTKLFTDSFIETQQKFTATL 178
            .:|: .:.......:...|.|.|...|:..   :...||.....|..:   |.| :...:|....
Zfish   115 LSQI-YSGLGYSALTPEQVNEGYEHLLHMLGHSQDAMQLEAGAGVAIR---DGF-KVVDQFLKDA 174

  Fly   179 KHFYDSEVEALDFTNPEAAADAINAWAANITQGRLQQLVAPDNVRSSVMLLTNLIYFNGLWRRQF 243
            :|:|:||...:||:.||.||..||.:.|..|..::..:| .|....:||:|.|.:||.|.|.:.|
Zfish   175 QHYYNSEAFGVDFSKPEIAAAEINKFIARKTHDKITNMV-KDLDADTVMMLINYMYFRGKWEKPF 238

  Fly   244 --ATTFQGSFFRSKDDQSRAEFMEQTDYFYYTTSEKLKAQILRLPYKGKNSLFVLLPYALNG-IH 305
              ..|.:..|...:|...:.:.|::|..:........:..::.:||||..|:.::||.  :| :.
Zfish   239 DAKLTHKADFKVDQDTTVQVDMMKRTGRYDIYQDPVNQTTVMMVPYKGNTSMMIVLPD--DGKMK 301

  Fly   306 DLVKNLENDELKSAQWAMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGAD 370
            :|.:::....||:....:....|.:.:|||.......|...|:.:|:.:.|.|.|...|:|... 
Zfish   302 ELEESICRHHLKNWHDKLFRSSVDLFMPKFSISATSKLDGILKDMGMTDAFNDKADFSGMTEEV- 365

  Fly   371 VAGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNIL 435
               |||||.:|.:|.::|:||||||.|.|.:||.......|.|    :||||:..|.|:||.:||
Zfish   366 ---KVKVSQVLHQAVMSVDEKGTEAAAITTIEIMPMSLPDTVI----LNRPFLVLIVEDSTMSIL 423

  Fly   436 FAGKVHSPT 444
            |.||:.:||
Zfish   424 FMGKITNPT 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 111/374 (30%)
serpina1XP_017207927.1 alpha-1-antitrypsin_like 69..428 CDD:239011 112/378 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3275
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.