DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpinb12

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_038946584.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:423 Species:Rattus norvegicus


Alignment Length:415 Identity:106/415 - (25%)
Similarity:201/415 - (48%) Gaps:66/415 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQV---------------ELANTQTDIRSQNN 134
            :..:.|.||:.:.|.|:.....::...|...:..|:               |.:...:..::.::
  Rat    19 ISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHFNELPKDERKEPSEPSSKSKASDS 83

  Fly   135 VREFYRKTLNS-------------------FKK------ENQLHETLSVRTKLFTDSFIETQQKF 174
            ..|..::|..|                   |.|      .::.|.|||:..:|:.:.......::
  Rat    84 SLEGQKQTTASQGQQVSGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYGEQEFPICPEY 148

  Fly   175 TATLKHFYDSEVEALDF-TNPEAAADAINAWAANITQGRLQQLV---APDNVRSSVMLLTNLIYF 235
            :..:..||.:.:|::|| .:.|.:.:.||.|..:.:||::::|.   |.||  |:|::|.|.:||
  Rat   149 SDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDN--STVLVLVNAVYF 211

  Fly   236 NGLWRRQF--ATTFQGSFFRSKDDQSRAEFMEQTDYFYYTTSEKLKAQILRLPY-KGKNSLFVLL 297
            ...|.::|  ..|....|..|::::...:.|.|...|.....|:|:||||.:.| .||.|:.|||
  Rat   212 KAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTTGKLSMLVLL 276

  Fly   298 PYA----LNGIHDLVKNLENDELKSAQWA----MEEVKVKVTLPKFHFDYQQNLKETLRSLGVRE 354
            |.:    :..:.:|.|.:.:::|.:  |:    |.|..|.::.|:|..:...:|...|:.:|:|:
  Rat   277 PSSSEDNVKSLQELEKKINHEKLLA--WSNPENMSEKPVAISFPQFIMEDSYDLNSVLQDMGIRD 339

  Fly   355 IFEDS-ASLPGLTRGADVAGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNV 418
            :|:.: |.|.|:::    :..:.:|.::.|..:.|:|.||:|.||:...:..|...|..  |||.
  Rat   340 VFDGTKADLTGISK----SPSLHLSKVVHKTFVEVDEMGTQAAAASGAVVAEKALPSRV--EFNA 398

  Fly   419 NRPFVFFIEEESTGNILFAGKVHSP 443
            ||||:|||....|.::||.|:|:||
  Rat   399 NRPFLFFIRHNGTQSLLFCGRVYSP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 103/410 (25%)
Serpinb12XP_038946584.1 serpinB12_yukopin 1..423 CDD:381037 104/413 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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