DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpina16

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_853661.2 Gene:Serpina16 / 299271 RGDID:727888 Length:415 Species:Rattus norvegicus


Alignment Length:466 Identity:103/466 - (22%)
Similarity:182/466 - (39%) Gaps:84/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAVMLLSLFLSALATGNGNSIPTTTTPQGVFETRTDKLPGGAASVPSGAGIYDDIDTFVPFRSDS 72
            :|:.:|||:|  |..|   .:|.:..||    |.........:.:|...|.       .||  .:
  Rat     1 MALSILSLWL--LLAG---LVPCSCDPQ----TPPPPEASNMSQIPVTQGA-------PPF--FN 47

  Fly    73 HDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLA--EAAGAGTQTQVELANTQTDIRSQNNV 135
            :..|:..|.|.:.|.:.. ||:|.||..:.:.|.|||  :...|..|...:|..|.|........
  Rat    48 NQKFALSLYKQLPQPKRG-KNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKAA 111

  Fly   136 REFYRKTLNSFKKENQLHET---LSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAA 197
            .| |.|.|:     |.||..   :...:.||.|..::..:.|.......|:|.|..:.|.|...|
  Rat   112 SE-YGKLLS-----NLLHTKNCGIYTGSLLFIDKTLKPAKTFVKLANSSYNSNVVLISFGNYGLA 170

  Fly   198 ADAINAWAANITQGRLQQLV----APDNVRSSVMLLTNLIYFNGLWRRQF--ATTFQGSFFRSKD 256
            ...|:......|.|::.:|:    .|.|     :.|.|..:|.|.|:..|  ..|....|:....
  Rat   171 QKQIDLAIRARTHGKITKLLRILKPPTN-----LFLANYNFFKGKWKYPFNRKHTRMRYFWLEDG 230

  Fly   257 DQSRAEFMEQTDYFYYTTSEKLKAQILRLPYKGKNSLFVLLPYALNGIHDLVKNLENDELKSAQW 321
            .::....|::..:|......::.:.:|:||:....|....||             ::.:.:.::.
  Rat   231 TKTLVPMMQRVGWFQLQYFSQMHSYVLQLPFTCSISGVFFLP-------------DDGKFEESEK 282

  Fly   322 AMEEVKVKVTL------------PKFHFD---YQQNLKETLRSLGVREIFEDSASLPGLTRGADV 371
            |:.|...:..:            |||...   :.:|||....::   ::|.:...|..:|.   .
  Rat   283 ALLEQSFETWIQPFPMSKRWLFFPKFSIPVALHLENLKHVNSNI---KLFSEHMDLSRITL---Q 341

  Fly   372 AGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILF 436
            ...:.||..:.:..:.|||.|.|         :::......:...:.||.|:..|.:|::.::||
  Rat   342 KAPLTVSTAVHRVELTVNEDGEE---------KDESQPEPDLATLHFNRSFLLLILDETSNSLLF 397

  Fly   437 AGKVHSPTTQN 447
            .|||.:||..|
  Rat   398 MGKVVNPTRIN 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 83/393 (21%)
Serpina16NP_853661.2 serpinA16_HongrES1-like 40..406 CDD:381053 89/414 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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