DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpina3c

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:456 Identity:114/456 - (25%)
Similarity:189/456 - (41%) Gaps:67/456 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VMLLSLFLSALATGNGNSIPTTTTPQGVFETRT----DKLPGGAASVPSGAGIYDDIDTFVPFRS 70
            ::.|.|.::.:..|      ....|.|..|..|    ||..|......:.|.|..|         
Mouse    23 IVALGLVITGICPG------VLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTD--------- 72

  Fly    71 DSHDPFSWHLLKTV-LQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQV-ELANTQTDIRSQN 133
                 |::.|.|.: |:|  .|.|::.||.|:...||:::..|...|..:: |..|.......:.
Mouse    73 -----FAFSLYKKLALKN--PDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEA 130

  Fly   134 NVREFYRKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAAA 198
            ::.:.:...|.......: ...:|..:.||.:..::...:|....:..|.:|....||..|..|.
Mouse   131 DIHQGFGHLLQRLSHPGE-QVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEAT 194

  Fly   199 DAINAWAANITQGRLQQLVAPDNVRSSVMLLTNLIYFNGLWRRQF--ATTFQGSFFRSKDDQSRA 261
            ..||.:.:|.||.:::.|:: |....::|:|.|.|||.|.|:..|  ..||:..|:.......:.
Mouse   195 KLINDYVSNQTQRKIKGLIS-DLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKV 258

  Fly   262 EFME----QTDYFYYTTSEKLKAQILRLPYKGKNSLFVLLPYALNGIHDLVKNLENDELKSAQWA 322
            ..|:    .|.||   ..|:|...::.|.|||..|...:|| ....:..:..:|:.:.|:..:.:
Mouse   259 PMMKIKTLTTPYF---RDEELSCTVVELKYKGNASALFILP-DQGRMQQVEASLQPETLRKWKNS 319

  Fly   323 MEEVKV-KVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAGI 386
            :...|: ::.||||......:||..|..||::|||...|.|.|:|...|:.    ||.::.||.:
Mouse   320 LRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTKDLI----VSQMVHKAVL 380

  Fly   387 NVNEKGTEAYAATVVEIENKFGGSTAIEEFNV---------NRPFVFFIEEESTGNILFAGKVHS 442
            :|.|.|||..|||.|             .|.:         ||.|:..|........||..|:..
Mouse   381 DVAETGTEGVAATGV-------------NFRILSRRTSLWFNRTFLMVISHTDVQTTLFIAKITH 432

  Fly   443 P 443
            |
Mouse   433 P 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 99/385 (26%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 105/417 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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