DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn27A and Serpinh1

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001104513.1 Gene:Serpinh1 / 12406 MGIID:88283 Length:417 Species:Mus musculus


Alignment Length:411 Identity:94/411 - (22%)
Similarity:173/411 - (42%) Gaps:44/411 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PGGAASVPSGAGIYDDIDTFVPFRSDSHDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAE 110
            ||.|..:.|.|....:..|.:.|.           |...:..:.|.:|:::||..|...|.|::.
Mouse    29 PGTAEKLSSKATTLAERSTGLAFS-----------LYQAMAKDQAVENILLSPLVVASSLGLVSL 82

  Fly   111 AAGAGTQTQVELANTQTDIRSQNNVREFYRKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFT 175
            ...|.|.:|.:...:...:|.: .|.....:.|.|.......:.|..:.::|:..|.:.....|.
Mouse    83 GGKATTASQAKAVLSAEKLRDE-EVHTGLGELLRSLSNSTARNVTWKLGSRLYGPSSVSFADDFV 146

  Fly   176 ATLKHFYDSEVEALDFTNPEAAADAINAWAANITQGRLQQLVAPDNVRSSVMLLTNLIYFNGLWR 240
            .:.|..|:.|...::|.:..:|..:||.||:..|.|:|.: |..|..|:...||.|.::|...|.
Mouse   147 RSSKQHYNCEHSKINFRDKRSALQSINEWASQTTDGKLPE-VTKDVERTDGALLVNAMFFKPHWD 210

  Fly   241 RQF--ATTFQGSFFRSKDDQSRAEFMEQTDYFYYTTSEKLKAQILRLPYKGK-NSLFVLLPYALN 302
            .:|  .......|..::........|.:|..:.|...||.|.|::.:|...| :||.:|:|:.:.
Mouse   211 EKFHHKMVDNRGFMVTRSYTVGVTMMHRTGLYNYYDDEKEKLQMVEMPLAHKLSSLIILMPHHVE 275

  Fly   303 GIHDLVKNLENDELKSAQWAMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTR 367
            .:..|.|.|..::||:....|::..|.::|||...:...:|::.|..||:.|..:.:        
Mouse   276 PLERLEKLLTKEQLKAWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKN-------- 332

  Fly   368 GADVAGKVKVSNILQKAGINVNEKGTEAYAATVVEIE---NKFGGSTAIEE-------FNVNRPF 422
                  |..:|.:..|..:.:    ...:.||..|.:   |.|.......|       |..:.||
Mouse   333 ------KADLSRMSGKKDLYL----ASVFHATAFEWDTEGNPFDQDIYGREELRSPKLFYADHPF 387

  Fly   423 VFFIEEESTGNILFAGKVHSP 443
            :|.:.:..:|::||.|::..|
Mouse   388 IFLVRDNQSGSLLFIGRLVRP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 86/380 (23%)
Serpinh1NP_001104513.1 serpinH1_CBP1 35..416 CDD:381003 91/405 (22%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.