DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn27A and Serpini1

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:382 Identity:107/382 - (28%)
Similarity:187/382 - (48%) Gaps:48/382 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 DKNVIISPFSVKLVLALLAEAAGAGTQTQVELANTQTDIRSQNNVREF-YRKTLNSFKKENQLHE 154
            |:|::.||.|:.|.:.::...|...|..::..:.....::|.   .|| :.:..:|.....:...
  Rat    43 DENILFSPLSIALAMGVMELGAQGSTLKEIRHSMGYESLKSG---EEFSFLRDFSSMVSAEEGQY 104

  Fly   155 TLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAAADAINAWAANITQGRLQQLVAP 219
            .:.:...||..:.....::|...:|.::::||..:||:...|.|:.||.|..|.|...|:.||:|
  Rat   105 VMKIANSLFVQNGFHINEEFLQMMKMYFNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSP 169

  Fly   220 DNVRSSVML-LTNLIYFNGLWRRQFATTFQGSFFRSKDDQSRAE---FMEQTDYFYYTTSEKLKA 280
            .:..:...| |.|.:||.|.|:.||......:|..:|||:|..:   ..:|.:::|...|:....
  Rat   170 GDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNE 234

  Fly   281 -----QILRLPYKGKN-SLFVLL-----PYALNGIHDLVKNLENDELKSAQWA--MEEVKVKVTL 332
                 |:|.:||:|.. |:.::|     |.|.  :..|:|....:|     ||  :::.||:|.|
  Rat   235 AGGIYQVLEIPYEGDEISMMLVLSRQEVPLAT--LEPLLKPQLIEE-----WANSVKKQKVEVYL 292

  Fly   333 PKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAGINVNEKGTEAYA 397
            |:|..:.:.:||:.|::|||.|||...|:|..::...::.    :|..:.|:.|.|||:|:||..
  Rat   293 PRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKELF----LSKAVHKSFIEVNEEGSEAAV 353

  Fly   398 ATVVEIENKFGGSTAIE-------EFNVNRPFVFFIEEESTGNILFAGKVHSPTTQN 447
            |:         |..||.       :..|:.||:|.|:...||.|||.|:|..|.|.|
  Rat   354 AS---------GMIAISRMAVLFPQVIVDHPFLFLIKNRKTGTILFMGRVMHPETMN 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 103/373 (28%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 107/382 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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