DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn27A and serpini1

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_031757359.1 Gene:serpini1 / 100144746 XenbaseID:XB-GENE-948443 Length:428 Species:Xenopus tropicalis


Alignment Length:402 Identity:117/402 - (29%)
Similarity:195/402 - (48%) Gaps:43/402 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FRSDSHD----PFS---WHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVELANT 125
            |.:..||    .||   :|.|:..::    |:|:|.||.|..:.|.::  ..||...:..|:.:.
 Frog    35 FGTSVHDETVNEFSIKVYHKLRATIE----DENIIFSPLSTAIALGMV--ELGARGSSLKEIRHV 93

  Fly   126 QTDIRSQNNVREFYRKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALD 190
            ....:.:|.......|.|::.....:.|..||:...|:..:......||...:|.::.:|||.:|
 Frog    94 LGYDKLKNGEEFSLLKDLSNMLTAQEKHYVLSIANSLYLQNGFHISDKFIQLMKKYFKAEVENVD 158

  Fly   191 FTNPEAAADAINAWAANITQGRLQQLVAPDNVRS-SVMLLTNLIYFNGLWRRQFATTFQGSFFRS 254
            |:.....|:.||.|..|.|..|::.||..|:..: :.::|.|.:||.|.|:.||......:|..:
 Frog   159 FSQGSTVANHINMWVENHTNNRIRDLVTADDFTNLTKLVLVNAMYFKGNWKSQFRPENTRTFSFT 223

  Fly   255 KDDQSRAE--FMEQTDYFYY--TTSEKLKA----QILRLPYKGKN-SLFVLL-----PYALNGIH 305
            |||:|..:  .|.|...|||  .|....:|    |:|.|||:|.. ||.::|     |.|.  :.
 Frog   224 KDDESEVQIPMMYQKGEFYYGEFTDGSNEAGGVYQVLELPYEGDEISLIIVLSRQEVPLAT--LE 286

  Fly   306 DLVKNLENDELKSAQWA--MEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRG 368
            .|:|....:|     ||  :::.||:|.||:|..:...|||:.|..||:.:||...|.|..::..
 Frog   287 PLLKAPLIEE-----WANSVKKQKVEVYLPRFKVEEVVNLKDVLMQLGITKIFSGEADLSAVSDS 346

  Fly   369 ADVAGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGN 433
            .|:.    |:..:.|:.:.|||:|:||.|::.:...::.  :....:..|:.||.|.|....||:
 Frog   347 KDLF----VAKAVHKSFLEVNEEGSEAAASSGMIANSRM--AVLYPQVIVDHPFFFVIRNRKTGS 405

  Fly   434 ILFAGKVHSPTT 445
            :||.|:|..|.|
 Frog   406 VLFMGRVMHPET 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 113/391 (29%)
serpini1XP_031757359.1 serpinI1_NSP 41..412 CDD:381005 112/389 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.