DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn27A and serpine1

DIOPT Version :9

Sequence 1:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_002941247.2 Gene:serpine1 / 100127732 XenbaseID:XB-GENE-969639 Length:403 Species:Xenopus tropicalis


Alignment Length:402 Identity:114/402 - (28%)
Similarity:180/402 - (44%) Gaps:67/402 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 FSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVELANTQTDIRSQNNVREFYR 140
            |...|.:.||.::.. ||:..||:.|...|::|...|...|..|:                   |
 Frog    35 FGLRLFQEVLADQWG-KNLGFSPYGVTSALSVLQSGAAGTTLDQI-------------------R 79

  Fly   141 KTLNSFKKE-------NQLHETLSVRTKLFTDS---------FIETQ--------QKFTATLKHF 181
            |.||...||       |:|.|.:|.:.|...|.         |::..        |:|.||. |.
 Frog    80 KALNYGHKEWAVALALNKLREQISGQQKSAEDPKPVHIADGLFVQRDLSLTPGFLQRFQATF-HR 143

  Fly   182 YDSEVEALDFTNPEAAADAINAWAANITQGRLQQLVAPDNVRS-SVMLLTNLIYFNGLWRRQF-- 243
            :.|:|   :||:...|.|.||.|..|.|.|.::.||..:|:.. :.::|.:.::|:|.|...|  
 Frog   144 HLSQV---NFTDVAQAKDIINQWVENKTDGMIKDLVGSNNIPPLTRLVLLSAVHFSGKWTVPFLE 205

  Fly   244 ATTFQGSFFRSKDDQSRAEFMEQTDYF---YYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGI 304
            ..|.|..|:||.....:.:.|..|..:   .:||.:.....::.|||:|:. |:.:..||..|..
 Frog   206 KATHQRPFYRSDGSHVQVQMMANTGKYNCSEFTTPDGDFYDVIELPYEGEELSMLIAAPYEKNVP 270

  Fly   305 HDLVKNLENDELKSAQW--AMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIF-EDSASLPGLT 366
            ...:.|:...|| .|||  .|::|...:.||||....:.:||:.|..||:.::| :::|....|:
 Frog   271 LSAITNILTPEL-IAQWKAQMKKVTRLLVLPKFSLLSEVDLKKPLERLGITDMFTQETADFSRLS 334

  Fly   367 RGADVAGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEEST 431
            .    ...:.||...||..:.|.||||.|.|||...:..:.    |..|..::.||:|.:....|
 Frog   335 S----EKPLYVSEAFQKIKVEVTEKGTRASAATAAILLARM----APLEVIMDHPFLFMVRHNPT 391

  Fly   432 GNILFAGKVHSP 443
            |.:||.|:|..|
 Frog   392 GTLLFVGQVMEP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 112/397 (28%)
serpine1XP_002941247.2 SERPIN 22..403 CDD:294093 113/400 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.