DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlnRS and GLN4

DIOPT Version :10

Sequence 1:NP_524841.1 Gene:GlnRS / 45786 FlyBaseID:FBgn0027090 Length:778 Species:Drosophila melanogaster
Sequence 2:NP_014811.3 Gene:GLN4 / 854339 SGDID:S000005694 Length:809 Species:Saccharomyces cerevisiae


Alignment Length:836 Identity:326/836 - (38%)
Similarity:458/836 - (54%) Gaps:93/836 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSD-----GTGMLIYHMATKLKPQ 63
            ::|...|..:|..::|.||.:||..|:.:|...:    ..|.||     .|..|::::|:.:|..
Yeast     5 EELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLI----KETPSDYQWNKSTRALVHNLASFVKGT 65

  Fly    64 TADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSLNANIDLQALEKECGVGVVVTPEQIERTV 128
            ......|:|..|:...|..:.:||||.:|:...|::...    ..:.:..|||:.:|.:|:...|
Yeast    66 DLPKSELIVNGIINGDLKTSLQVDAAFKYVKANGEASTK----MGMNENSGVGIEITEDQVRNYV 126

  Fly   129 QAKIKASYKEALLEQRYHFNSFKILQDVRG--ELKWADAKSVKAAIDVEIFDLLGPKTEADL-KP 190
            ...|:.: ||.:|.:||.... .|..||:.  ||||||.:|.|..||.|:..|||||.|.|| |.
Yeast   127 MQYIQEN-KERILTERYKLVP-GIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDERDLIKK 189

  Fly   191 QTKANDKPKAAKPKAEVTPAAQTAEAASDGATTISELMKTKVHFHAPGENFKADGYVVTEHTE-- 253
            :||.|:|.|           ..:|:.:||.:.: |...:|..:     |.|..|.:.|.|:.:  
Yeast   190 KTKNNEKKK-----------TNSAKKSSDNSAS-SGPKRTMFN-----EGFLGDLHKVGENPQAY 237

  Fly   254 -RLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGVCYLRYDDTNPEKEEEKF 317
             .|:||||..|||||.|||||||||.|||||:|||.:|||||..|:|.||||:||||||||..::
Yeast   238 PELMKEHLEVTGGKVRTRFPPEPNGYLHIGHSKAIMVNFGYAKYHNGTCYLRFDDTNPEKEAPEY 302

  Fly   318 FLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAVVLINKGLAYVCHQKAEELK---GFNPKPSP-- 377
            |.:||.||.|||:||:|||||||.|.:||..|.|||..|.|||||..|||:|   |.....:|  
Yeast   303 FESIKRMVSWLGFKPWKITYSSDYFDELYRLAEVLIKNGKAYVCHCTAEEIKRGRGIKEDGTPGG 367

  Fly   378 ------WRERPIEESLRLFEDMKRGKIDEGAATLRMKVTLEEGK---MDPVAYRIKFISHHRTGS 433
                  .|::.||::|:.|.||:.||...|.|.||||..|....   .|.:|||:....|.|||:
Yeast   368 ERYACKHRDQSIEQNLQEFRDMRDGKYKPGEAILRMKQDLNSPSPQMWDLIAYRVLNAPHPRTGT 432

  Fly   434 DWCIYPTYDYTHCLCDSLEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYALVS 498
            .|.||||||:||||.||:|:|||||||.||...|.||.|||:.:.::.|.|.||||||:...::|
Yeast   433 KWRIYPTYDFTHCLVDSMENITHSLCTTEFYLSRESYEWLCDQVHVFRPAQREYGRLNITGTVLS 497

  Fly   499 KRKIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIAVDPAMLEAAVRDV 563
            |||||:|:.|:.|..|||||||||.|:||||.|..||.:|...:|||.:...:.....|:|||..
Yeast   498 KRKIAQLVDEKFVRGWDDPRLFTLEAIRRRGVPPGAILSFINTLGVTTSTTNIQVVRFESAVRKY 562

  Fly   564 LNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQNPQQGTHKITLDKVIYIEQGDFKLE-PE 627
            |..|.||.:.||:|::|.:.|..........:|..|..|:.|...:......|||:.||... .:
Yeast   563 LEDTTPRLMFVLDPVEVVVDNLSDDYEELATIPYRPGTPEFGERTVPFTNKFYIERSDFSENVDD 627

  Fly   628 KGYRRLAPKQSVGLRHAGLVISVDEIVKDPATGQVVELICT----SQPAEQAEKPKAFVQWV--- 685
            |.:.||.|.|.|||......:|...:.||.| |:::.:...    .:...:.:|||.::|||   
Yeast   628 KEFFRLTPNQPVGLIKVSHTVSFKSLEKDEA-GKIIRIHVNYDNKVEEGSKPKKPKTYIQWVPIS 691

  Fly   686 ---SQPIQL-EVRLYEQLFKHKNPEDPNEVPGGFLSDISEQSMSVVVA------FADRALNQAKV 740
               :.|::: |.|:|.||||.:|   |:..|.|||.||:.:|..|...      |.|...|...|
Yeast   692 SKYNSPLRVTETRVYNQLFKSEN---PSSHPEGFLKDINPESEVVYKESVMEHNFGDVVKNSPWV 753

  Fly   741 YD-------------------KFQFERIGFFSVDPDTSANHLVFNRTVGLKEDAGK 777
            .|                   :||..|:|:|::|.:::.:.::.||.|.||:...|
Yeast   754 VDSVKNSEFYVEEDKDSKEVCRFQAMRVGYFTLDKESTTSKVILNRIVSLKDATSK 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlnRSNP_524841.1 PLN02859 10..777 CDD:178450 324/828 (39%)
GLN4NP_014811.3 tRNA_synt_1c_R1 5..163 CDD:461353 47/167 (28%)
tRNA_synt_1c_R2 166..244 CDD:461352 30/94 (32%)
glnS 252..807 CDD:273079 239/558 (43%)

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