DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlnRS and Ears2

DIOPT Version :9

Sequence 1:NP_524841.1 Gene:GlnRS / 45786 FlyBaseID:FBgn0027090 Length:778 Species:Drosophila melanogaster
Sequence 2:NP_080416.1 Gene:Ears2 / 67417 MGIID:1914667 Length:523 Species:Mus musculus


Alignment Length:548 Identity:122/548 - (22%)
Similarity:187/548 - (34%) Gaps:199/548 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 GGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGVCYLRYDDTNPEKEEEKFFLAIKEMVEWL 328
            |..|..||.|.|.|.||:|..:....|:.:|..|.|...||.:||:..:.......:|::|:||.
Mouse    34 GAPVRVRFAPSPTGFLHLGGLRTALYNYIFAKKHQGSFILRLEDTDQSRLVPGAAESIEDMLEWA 98

  Fly   329 GYKPFKI--------TYSSDNFQQLYEWAV-VLINKGLAYVCH---QKAEELK------------ 369
            |..|.:.        .|.......||..|. .|:..|.||.|.   |:.|.||            
Mouse    99 GIPPDESPRRGGPAGPYCQSQRLALYAQATEALLRSGAAYPCFCLPQRLELLKKEALRSRQTPRY 163

  Fly   370 ----------------GFNPKPSPWRERPIEESLRLFEDMKRGKIDEGAATLRMKVTLEEGKMDP 418
                            ..:|||: .|.| :||::..|:|:..|......|::       ||  ||
Mouse   164 DNRCRNLSQAQVAQKLAVDPKPA-IRFR-LEEAVPAFQDLVYGWTQHEVASV-------EG--DP 217

  Fly   419 VAYRIKFISHHRTGSDWCIYPTYDYTHCLC---DSLEDITHSLCTKEFQSRRSSYYWLCNALGIY 480
            |..:          ||.  :|||   |..|   |....|:|.|...|:....|.:..|..|||  
Mouse   218 VILK----------SDG--FPTY---HLACVVDDHHMSISHVLRGSEWLVSTSKHLLLYQALG-- 265

  Fly   481 CPVQWEYGR-------LNMNYALVSKRKIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNF 538
                |:..|       ||.:.:.:|||: ..:..|.          |..|     ||..||:.:.
Mouse   266 ----WQPPRFAHLPLLLNRDGSKLSKRQ-GDIFLEH----------FAAT-----GFLPEALLDI 310

  Fly   539 CAQMGVTGAQIAVDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLE-VPDF---- 598
            ....|...|:             :.:..|.|..:...:..::|.    |:|.:.|| :|:|    
Mouse   311 ITNCGSGFAE-------------NQMGRTLPELITQFDLTRITC----HSALLDLEKLPEFNRLH 358

  Fly   599 --------PQNPQ-----QG----------THKITLD-----KVIYIEQGDFK-----LEPEKGY 630
                    .|.||     ||          .:|..||     :::.:.||...     :.|...|
Mouse   359 LRRLVSSETQRPQLVEKLQGLVKEAFGSELQNKDVLDPAYMERILLLRQGHISRLQDLVSPVYSY 423

  Fly   631 RRLAP------------------KQSVG-LRHAGLVI----------------------SVDEIV 654
            ....|                  |:.:| |...||.:                      ||.:::
Mouse   424 LWTRPAVHRSELGASSENVDVIAKRLLGLLERPGLSLTQDVLNRELKKLSEGLEGAKHSSVMKLL 488

  Fly   655 KDPATGQ-----VVELICTSQPAEQAEK 677
            :...:||     |.|::.:..|.|..|:
Mouse   489 RMALSGQLQGPPVAEMMVSLGPKEVRER 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlnRSNP_524841.1 PLN02859 10..777 CDD:178450 122/548 (22%)
Ears2NP_080416.1 gltX 36..521 CDD:234953 121/546 (22%)
GluRS_core 37..361 CDD:173905 94/388 (24%)
Glutamate binding. /evidence=ECO:0000250 40..42 1/1 (100%)
'HIGH' region 45..53 4/7 (57%)
Glutamate binding. /evidence=ECO:0000250 228..232 2/6 (33%)
'KMSKS' region 284..288 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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