DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlnRS and qrs1

DIOPT Version :9

Sequence 1:NP_524841.1 Gene:GlnRS / 45786 FlyBaseID:FBgn0027090 Length:778 Species:Drosophila melanogaster
Sequence 2:NP_596745.1 Gene:qrs1 / 2540978 PomBaseID:SPBC342.02 Length:811 Species:Schizosaccharomyces pombe


Alignment Length:835 Identity:343/835 - (41%)
Similarity:459/835 - (54%) Gaps:93/835 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDLIAKFQALGMSEQKAKETLKNANVTKNLQ--LSLAAAGSATLSDGTGMLIYHMA-TKLK---P 62
            ::|.|||..:|::|...|:||||..::.:|.  :.....||:......|.|::.:| ..||   |
pombe     6 EELRAKFTKIGLNETTVKDTLKNKKLSSSLNKVIEETNVGSSGCDRTIGNLLFTLANASLKQKDP 70

  Fly    63 QTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSLNANIDLQALEKECGVGVVVTPEQIERT 127
            ::..|...:...||...|....:|:||:.|   |..  ...||....:||.|||||:||||||:.
pombe    71 KSNAHEAFIASKIVSGDLKTNLQVNAAITY---CKD--KDTIDESEFDKETGVGVVLTPEQIEQL 130

  Fly   128 VQAKIKASYKEALLEQRYHF--NSFKILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEADLKP 190
            |...: |..|..:|||||..  .|...|:. ...||||....||..:|.:..:|||||||.|...
pombe   131 VGDYV-AENKSKILEQRYQLLNPSASALRQ-HALLKWAPQLEVKQTLDRKFLELLGPKTEQDAAA 193

  Fly   191 QTKANDKPKAAKPKAEVTPAAQTAEAASDGA---TTISELMKTKVHFHAPGENFKADGYVVTEHT 252
            ..|...|.|.:|.|...:..|:..:..|:.:   ....|....|:  |.||.|        |:..
pombe   194 GKKKGAKAKNSKQKTVDSGKAKEQKIVSEQSKKYNMFEEGFLAKL--HKPGGN--------TQLI 248

  Fly   253 ERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGVCYLRYDDTNPEKEEEKF 317
            ...:||||..|||.|.|||||||||.|||||:|||.:|||:|..|:||||||:||||||.|||::
pombe   249 PERMKEHLQATGGGVVTRFPPEPNGYLHIGHSKAIAVNFGFARYHNGVCYLRFDDTNPEAEEERY 313

  Fly   318 FLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAVVLINKGLAYVCHQKAEELK----GFNPKP--- 375
            |.:||::|.|||::|:|||||||.|.:|||.|..||.:..|||||....|:|    |....|   
pombe   314 FESIKDLVAWLGFQPYKITYSSDYFDKLYELAEELIKRDKAYVCHCTDAEIKKARGGEERGPRYA 378

  Fly   376 SPWRERPIEESLRLFEDMKRGKIDEGAATLRMKVTLEEGK---MDPVAYRIKFISHHRTGSDWCI 437
            ...|:|||||||..|.:|:.||.....|.||||..|.:|.   .|.:|||:....|.|||..|.|
pombe   379 CVHRDRPIEESLLEFRNMRDGKYQPKEAILRMKQDLSDGNPQMWDLIAYRVLNSPHPRTGDKWKI 443

  Fly   438 YPTYDYTHCLCDSLEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKRKI 502
            |||||:||||.||.|:|:|||||.||...|.||.||||||.:|||.|.||||||:...|:|||||
pombe   444 YPTYDFTHCLVDSFENISHSLCTTEFILSRVSYEWLCNALEVYCPAQREYGRLNVVGTLMSKRKI 508

  Fly   503 AKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIAVDPAMLEAAVRDVLNVT 567
            .||:.|..||.|:||||:||.||||||.|..||..|.:::|||.|...::.|..|..||..|..:
pombe   509 MKLVKEGYVHGWNDPRLYTLVALRRRGVPPGAILEFVSEVGVTTAVSNIEVARFENCVRKFLENS 573

  Fly   568 APRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQNPQQGTHKITLDKVIYIEQGDFKLEPEKGYRR 632
            .||.:.:.:|:|||::|...:...|:|:|..|::|..|:....|.|.|||::.||:.|....:.|
pombe   574 VPRLMFLPDPIKVTLENLDDSYREQIEIPFNPKDPSMGSRSAFLTKHIYIDRSDFREEASSDFFR 638

  Fly   633 LAPKQSVGLRHAGLVISVDEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQ------PIQL 691
            |...|.|||..|...:....:||:. .|:.:|:| ....|..::|||.|:||||:      |:.:
pombe   639 LTLGQPVGLFRASHPVVAKRVVKND-EGEPIEII-AEYDASSSKKPKTFIQWVSRDKESNSPVLI 701

  Fly   692 -EVRLYEQLFKHKNPEDPNEVPGGFLSDISEQSMS--------VVV------------------- 728
             |.||:..|||..||           :.:.||.::        ||:                   
pombe   702 AETRLFNNLFKCDNP-----------AALKEQELAAQLNPESEVVLKNSIIEPGIYDLIKSAPWP 755

  Fly   729 -----AFADRALNQAKVYDKFQFERIGFFSVDPDT-SANHLVFNRTVGLKEDAGK 777
                 |..|:|.|...|  :||..|:|:|.:|.|| ..||||.||.|.|:||:.|
pombe   756 KTDSSAGVDKAENPESV--RFQAMRVGYFCLDEDTKKPNHLVLNRIVSLREDSAK 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlnRSNP_524841.1 PLN02859 10..777 CDD:178450 339/827 (41%)
qrs1NP_596745.1 PLN02859 12..808 CDD:178450 339/827 (41%)
tRNA_synt_1c_R1 12..167 CDD:282424 54/161 (34%)
tRNA_synt_1c_R2 171..254 CDD:282423 25/92 (27%)
GlnRS_core 263..576 CDD:185676 174/312 (56%)
tRNA-synt_1c_C 575..785 CDD:281883 65/224 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 335 1.000 Domainoid score I197
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3704
Inparanoid 1 1.050 534 1.000 Inparanoid score I213
OMA 1 1.010 - - QHG60878
OrthoFinder 1 1.000 - - FOG0002938
OrthoInspector 1 1.000 - - oto101859
orthoMCL 1 0.900 - - OOG6_101072
Panther 1 1.100 - - LDO PTHR43097
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1454
SonicParanoid 1 1.000 - - X2299
TreeFam 1 0.960 - -
1413.860

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