DRSC/TRiP Functional Genomics Resources

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Protein Alignment ThrRS and AT1G17960

DIOPT Version :9

Sequence 1:NP_001285868.1 Gene:ThrRS / 45784 FlyBaseID:FBgn0027081 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_173238.1 Gene:AT1G17960 / 838375 AraportID:AT1G17960 Length:458 Species:Arabidopsis thaliana


Alignment Length:671 Identity:223/671 - (33%)
Similarity:313/671 - (46%) Gaps:232/671 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KELSPLPKYIEERNVFWEKCKAEYEAELAAKKREPIKVT-LPDGKQVDATSWETTPYEVARGISQ 137
            |:.:.|...|.:|...:|:.:||...:|.::..:|||:| ||||.:.:...|||:|.::|..||:
plant     8 KDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWETSPMDIAVQISK 72

  Fly   138 GLADNTVISKVNGEVWDLDRVLEGNCTLQLLKFDDPEAQAVFWHSSAHIMGEAMERIYGGHLCYG 202
            |||.:.::|.||..:||::|.|||:|:|::..||..:.:..||||||||:|:|:|:.||..||.|
plant    73 GLAKSALVSSVNHVLWDMNRPLEGDCSLEIFGFDSDQGRNTFWHSSAHILGQALEQEYGCKLCIG 137

  Fly   203 P--PIENGFYYDMHLEGEGISTNDYGAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKYNEFKVRI 265
            |  |.:.|||||....|| :..||                                  |.|    
plant   138 PCEPRDEGFYYDSLYYGE-LGLND----------------------------------NHF---- 163

  Fly   266 LNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSSTYWEGKADAETLQRVYGISFPD 330
                                                                             
plant   164 ----------------------------------------------------------------- 163

  Fly   331 PKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGF 395
                                                                             
plant   164 ----------------------------------------------------------------- 163

  Fly   396 QEVISPNIYNAKLWMTSGHWQHYAENMFSFEAEKEKFALKPMNCPGHCLIFDNRNRSWRELPLRM 460
                 |||                      ||                           :||:||
plant   164 -----PNI----------------------EA---------------------------KLPIRM 174

  Fly   461 ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFGFSFQLVLS 525
            |:||||||||.||||.|:||||||.||||||||..:|::.|:||.|:|:.|||.||||:::|.||
plant   175 AEFGVLHRNEDSGALGGMTRVRRFVQDDAHIFCRVDQVEEEVKGVLDFIDYVYRIFGFTYELTLS 239

  Fly   526 TRPDNYLGELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLD 590
            |||.:::|:||.|..||..|.::|::||.||....|||||||||||||:.||..|..||||||||
plant   240 TRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLD 304

  Fly   591 FQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGPAY 655
            ||||..|.|.|:::..|.:.||:||.|:|||:|||.|||.|::.|.|||||||||.:|..:....
plant   305 FQLPACFKLKYLSEKNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDC 369

  Fly   656 DQYAQSVRDQLHDAGFMSEADCDAGD-TMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNK 719
            ..||:.|:.|:::.|:.  .|.|..| ::.||:.:|:.|.:|:|||||.||.::..|.||.|::.
plant   370 SSYAKQVQKQINEVGYY--VDIDESDRSLRKKVADARDAPYNYILVVGQKEVATGQVTVRLREDP 432

  Fly   720 VHGEVSVAELITKLQKIRDEF 740
             .|...:.|:  .::.:.|||
plant   433 -EGRKDLPEM--SIESLLDEF 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ThrRSNP_001285868.1 PLN02908 79..740 CDD:178496 220/664 (33%)
TGS_ThrRS_N 109..170 CDD:133437 28/61 (46%)
tRNA_SAD 276..323 CDD:197931 0/46 (0%)
ThrRS_core 347..643 CDD:238394 121/295 (41%)
ThrRS_anticodon 643..734 CDD:238437 30/91 (33%)
AT1G17960NP_173238.1 PLN02908 6..457 CDD:178496 223/671 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 88 1.000 Domainoid score I2717
eggNOG 1 0.900 - - E1_COG0441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D813937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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