DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ValRS and IleRS-m

DIOPT Version :10

Sequence 1:NP_001260946.1 Gene:ValRS / 45783 FlyBaseID:FBgn0027079 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_648837.2 Gene:IleRS-m / 39762 FlyBaseID:FBgn0036569 Length:941 Species:Drosophila melanogaster


Alignment Length:1076 Identity:233/1076 - (21%)
Similarity:400/1076 - (37%) Gaps:285/1076 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RLKAEKLAKLQAK-------LDKKAAAAPAAGEKKEKPEKRTKEVKEAAVYTAQTAPGEKKDLSG 88
            ||.:.|.||..||       |.|..........|:|:.|:...|.|.|..|..|    |::    
  Fly    12 RLYSMKAAKKDAKKYTDTINLPKTKFPNRLTAAKREEQERLVLENKIAVSYAYQ----EQR---- 68

  Fly    89 ALPDAYSPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNA 153
                                     ..|.|:.:         ||:...||...|.||:|||:...
  Fly    69 -------------------------LAEKGKPT---------FVLHDGPPYANGQLHMGHAVNKI 99

  Fly   154 IEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKLSRHDLGREKFIERIWDWRREKG 218
            ::|...|.....|:...::||.|..|:..::   |........|..:: |:|  .|.:.|...|.
  Fly   100 LKDITLRQRVAHGQRVNYIPGWDCHGLPIEL---KATSTAPGQSAQEI-RQK--SRAFAWEAIKS 158

  Fly   219 GRIYEQLKSLGSSYDWTR--VAFTMDPKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281
            .:  |:..|.|...:|.:  :..|..|:......|.|..|:|:|.:||..:.|.||.:.|:|:::
  Fly   159 QK--EEFSSWGILANWQKDNIYMTFQPEFIVNQLEMFYNLYEKGLVYRDLKPVYWSPSSRTALAE 221

  Fly   282 IEVDKVEIPGRTFLSIPGYE-DKVEFGVLIKFAY---KVEGSDEEI--IVATTRIETMLGDTAVA 340
            .|::              |: :.:...|.::||.   ..:..|::|  :|.||...|:..:.|:.
  Fly   222 AELE--------------YDANHISPSVYVRFALNPSSFDVKDKQIYALVWTTTPWTLPSNQAIC 272

  Fly   341 VHP-------------QDDRY---------------------KHLHGKFVV-----HPFSTRR-- 364
            .:.             ||:.|                     :||.|:.:.     ||....:  
  Fly   273 YNASLEYVIVRLSDRNQDELYLMASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPIDKEQSN 337

  Fly   365 LPIVCDEFVDMAFGTGAVKITPAHDPNDYEVGKRCNLPFITIFNDDGYIIGDYGEFTGMKRFECR 429
            ||......|..:.|||.|...|||.|.|:.|.....:|.....|::|....:..:|..      .
  Fly   338 LPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFLR------G 396

  Fly   430 KKILEKLKALNLYR---ETLNNPMV---VPICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSG 488
            |.:|::..:|.|.|   :.:::..:   .||..|:|..|......||:::...:...|.:|:.  
  Fly   397 KSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPAADALE-- 459

  Fly   489 ELKIIP----EHHTKTWYHWMDGIRDWCVSRQLWWGHRIPAYHVSFTDPSLQTG----SSA---- 541
            :::|.|    |...|.....:.....||:|||..||..||..:      |.::|    :||    
  Fly   460 QVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLY------SRESGKVVLNSALIEH 518

  Fly   542 -------HGSVNDDEQYWIVARSE--AEALTKAAERFGVDASKIVLKQDEDVLDTWFSSGIFPFS 597
                   .||:   :.:|:.:..|  .|.|.:.......|     |.:..|:||.||.||....:
  Fly   519 LCNLLRKEGSI---DFWWVKSVEELVPEHLLRELHHEAKD-----LVKGTDILDIWFDSGSTWSA 575

  Fly   598 VFGWPDQTKDLQTFYPTSLLETGHDILFFWVARMVFFGQKLLGKL------PFKEVYLHPMVRDA 656
            |.| .|:..||       .|| |:|....|      |...||..:      |:|.:::|....|.
  Fly   576 VLG-KDKIADL-------YLE-GYDQFTGW------FQSSLLMSIAARECAPYKALFVHGFTVDE 625

  Fly   657 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAGQKQDYPQGIPECGSDALR 721
            .|.||||||||||.|..:.:                                     :.|:||||
  Fly   626 KGYKMSKSLGNVISPKQITK-------------------------------------KYGTDALR 653

  Fly   722 FALCAYITQARDINLDINRVL--GYRFFCNKLWNATKFALLYFTGSEKFDTELSASAAINQMDAW 784
            :.:.::.||...|.:. :::|  .....| |:....:: |....|.::...:|..::..:.::.:
  Fly   654 WWVASHGTQHMSITVS-DKLLQQAAENLC-KIRGTMRY-LKGVIGEKQSGEKLIRTSDKSYLNRY 715

  Fly   785 ILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKPIFQSGSEEQQTAARRTLYV 849
            :||:|..........:::|::....:....|....:..||:..:|.....|.:.:..|.|:||..
  Fly   716 LLSQLVEFESEVEKLYQAYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCGDDHELLAIRQTLTH 780

  Fly   850 CLDYGLRLLSPFMPFITEE-----------LYQRLPRANPAPSICVASYPSNTSWRSTKIESDVE 903
            |.....:.|.|.:||:.||           .::::.:.||             .|:.||....:.
  Fly   781 CYQQLCKSLWPIVPFLVEESWSYYDTTGGAFHEQIVQTNP-------------EWQDTKATEVIN 832

  Fly   904 FVQKAARIIRSARSDYN-------LPNKVKTEVYIVCTDSVPSEILKRYASDLATISYCSNVVFD 961
            ......|:|.....|.|       :..|.::::          ::|:...|.|......|.:   
  Fly   833 AAFDVKRLINQQAGDVNTWHLAVTIKGKERSQL----------DLLRELHSPLGESVSNSEL--- 884

  Fly   962 SPAPQGCAILTVTGQCEVHLLLKGLVEADKEIAKLQ 997
                  |.||.|.   .|.||.....:.|..::|||
  Fly   885 ------CEILQVG---SVTLLQSHNSDLDIALSKLQ 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRSNP_001260946.1 PTZ00419 80..1053 CDD:240411 216/1020 (21%)
IleRS-mNP_648837.2 IleS 26..936 CDD:439830 226/1062 (21%)

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