DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ValRS and MetRS

DIOPT Version :10

Sequence 1:NP_001260946.1 Gene:ValRS / 45783 FlyBaseID:FBgn0027079 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster


Alignment Length:1103 Identity:205/1103 - (18%)
Similarity:319/1103 - (28%) Gaps:460/1103 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KEVKEAAVYTAQTAPGEKKDLSGALPDAYSPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGK 130
            :|:..|......|||.|.|:....|                                  |.|..:
  Fly   224 EEISAAKAAFTYTAPKEIKEERTVL----------------------------------PKPGER 254

  Fly   131 FVMIIPP-PNVTGSLHLGHALTNAIE-DAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRD 193
            .|:|... |.|....|||:.:...:. |...||.|..|..||.:.|.|..|.||:   .|.|  .
  Fly   255 NVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATE---NKAL--A 314

  Fly   194 EKLSRHDLGREKFIE---RIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAVTEAFVR 255
            |.|:..:: .:|:.|   .|:.|              .|..:|:          ..|..|:    
  Fly   315 ENLTPREI-CDKYFELHNAIYRW--------------FGIGFDY----------FGRTTTQ---- 350

  Fly   256 LHEEGSIYRSSRLVNWSCTLRSAISDIEVDKVEIPGRTFLSIPGYEDKVEFGVLIKFAYKVEGSD 320
              |:..|            ::.|..|:                           :|..|.:..|.
  Fly   351 --EQTDI------------VQEAFKDV---------------------------LKAGYIITESV 374

  Fly   321 EEIIVATTRIETMLGDTAVAVHPQDDRYKHLHGKFVVHPFSTRRLPIVCDEFVDMAFGTGAVKIT 385
            |:::...                                         ||.|:...|..|    |
  Fly   375 EQLLCQK-----------------------------------------CDRFLADRFVEG----T 394

  Fly   386 PAHDPNDYE--VGKRCNLPFITIFNDDGYIIGDYGEFTGMKRFECRKKILEKLKALNLYR---ET 445
            ..|....||  .|.:|:                          :|.|.:    .|..|.|   :.
  Fly   395 CPHPGCGYEDARGDQCD--------------------------KCGKLV----NATELIRPRCKV 429

  Fly   446 LNNPMVVPICSRSKDVV-------EPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWYH 503
            .|:..|:    ||.|.:       ||.:| :|        ...:|...:...|:|    |:.|. 
  Fly   430 CNSAPVL----RSSDQLFIDLPKAEPQLK-EW--------VDKSEGGWTHNAKVI----TRAWL- 476

  Fly   504 WMDGIRDWCVSRQLWWGHRIPAYHVSFT--------DPSLQTGSSAHGSVNDDEQYWIVARSEAE 560
             .:|::..|::|.|.||  ||..|..|.        |......|.......:.:|:|..|:    
  Fly   477 -KEGLKPRCITRDLKWG--IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQPAK---- 534

  Fly   561 ALTKAAERFGVDASKIVLKQDEDVLDTWFSSGIFPFSVFGWPDQTKDLQTFYPTSLLETGHDILF 625
                     |.|.........::|          ||....||.                      
  Fly   535 ---------GTDVELFQFMAKDNV----------PFHSVVWPS---------------------- 558

  Fly   626 FWVARMVFFGQKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGS 690
              |...:..|..|:..:...| ||:  ..|.   |.|||           |||.:.|..||    
  Fly   559 --VLLAINKGHTLVSHIMATE-YLN--YEDG---KFSKS-----------RGIGVFGNDAQ---- 600

  Fly   691 NLDPREIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLD------------------ 737
                              ..|||   :|..||.|.:...:.:|.:..                  
  Fly   601 ------------------ETGIP---ADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGN 644

  Fly   738 -INRVLGYRFFCNKLWNATKFALLYFTGSEKFDTELSASAAIN-QMDAWILS----------RLA 790
             :||.|   .||.|.:::|      ..|......||...|.|| ::..:|.|          |..
  Fly   645 FVNRAL---VFCEKNFSST------VPGVITTQDELVLLALINRELRGYINSMEKAKLRDGVRHL 700

  Fly   791 AAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKP-IFQSGSEEQQTAARRTLYVCLDYG 854
            .||.....|                        |::..:| :...|:::|:|.|...:.:|::..
  Fly   701 LAISRHGNG------------------------YMQSQQPWVLLKGTDDQKTRASTIIGLCVNIA 741

  Fly   855 ---LRLLSPFMPFITEELYQR------------------LPRAN----PAPSICV---------- 884
               ..||.|:||.....|:.:                  ||..:    |||....          
  Fly   742 CLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPAGHQIGKPAPLFAKLEQSFIDELK 806

  Fly   885 ----ASYPSNTSWRSTKIESDVEFVQKAARIIRSARSDYNLPNKVKTEVYIVCTDSVPSEI-LKR 944
                .:..:|.:..|....:|:|   ||.:    |::|.....|..|:...:....|...: ||:
  Fly   807 GKYGGAQATNDAAHSQISAADLE---KAVQ----AQADKVRELKASTKDKAIWQPEVTKLLDLKK 864

  Fly   945 YASDLATISYCSNVVFDSPAPQGCAILTVTGQCEVHLLLKGLVEADKEIAKLQ------------ 997
            ...:....:..:.....:|||.       .|...|..|.|.:.|...::.||:            
  Fly   865 QLEEAKKKTATAAAPAATPAPS-------NGSQSVQDLEKAIQEQGDKVRKLKGSTKDKTVWQPE 922

  Fly   998 -------KKSDQLVQTVGKLTQAIQAADYATKVPAEVQEANETKLCESRAEIERIAAAIETLK 1053
                   ||..:.||...|...|..||..|:  ||...:|.:.|..|.:  |.:.|..:.|||
  Fly   923 VNILLDLKKQLEAVQKAAKAAPAANAAPAAS--PAATADAAKVKALEDK--IAQQAEKVRTLK 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRSNP_001260946.1 PTZ00419 80..1053 CDD:240411 199/1087 (18%)
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 166/935 (18%)
MetRS_RNA 895..938 CDD:238475 8/42 (19%)
MetRS_RNA 966..1009 CDD:238475 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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