DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and SCL1

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_011504.3 Gene:SCL1 / 852873 SGDID:S000002979 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:247 Identity:121/247 - (48%)
Similarity:167/247 - (67%) Gaps:9/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHL 69
            |:||:||||||||||||||||||||||..|.||.::|::..||.||.:||||.:|.:.|.||:::
Yeast     8 SAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYI 72

  Fly    70 FRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPL 134
            |.|::.||..:.|.|.|:|:...:|:.|||.|||||||:||.|||.:|:|:::|:|||.|.||||
Yeast    73 FCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPL 137

  Fly   135 GCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNL-------SEEKA 192
            |..:..::.|.|:|||:||||||||:.|:||.:.|.|..|..:.||..:|.:.       |.||.
Yeast   138 GVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKV 202

  Fly   193 IQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
            ::.||:.:...|..:|..|.:|:||.:|.  .|..|....|||.|..|||:|
Yeast   203 VEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIAEQD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 118/242 (49%)
proteasome_alpha_type_6 8..218 CDD:239723 107/216 (50%)
SCL1NP_011504.3 proteasome_alpha_type_6 12..228 CDD:239723 106/215 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346444
Domainoid 1 1.000 170 1.000 Domainoid score I781
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2085
Inparanoid 1 1.050 238 1.000 Inparanoid score I697
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53623
OrthoFinder 1 1.000 - - FOG0002933
OrthoInspector 1 1.000 - - oto99999
orthoMCL 1 0.900 - - OOG6_102240
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1008
SonicParanoid 1 1.000 - - X1933
TreeFam 1 0.960 - -
1514.790

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