DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and Psma8

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001157081.1 Gene:Psma8 / 73677 MGIID:1920927 Length:250 Species:Mus musculus


Alignment Length:241 Identity:79/241 - (32%)
Similarity:134/241 - (55%) Gaps:11/241 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.||:|||:|.|:|||||.:|: ::..|.|.::..:..|:..:||...|.....||..:..:.
Mouse     5 YDRAITVFSPDGHLFQVEYAQEAV-KKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALD 68

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDV--LCRRIADINQVYTQNAEMRPLGC 136
            ..:..|..|..||:|..:.:||.|..:  :|...|.||.|  :.|.||.:.|.|||:...||.|.
Mouse    69 DHVCMAFAGLTADARVVISRARVECQS--HKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGI 131

  Fly   137 SMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNL--SEEKAIQLAISC 199
            |.:::.:|::..|.:|:|||:|.:..:||.::|........:|||.|..:.  ::::||:|||..
Mouse   132 SALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKA 196

  Fly   200 LSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI-AEKD 244
            |..|:....|  .||:.::.:..| .::...:|||..:::| .|||
Mouse   197 LLEVVQSGGK--NIELAIIRRDQP-LKMFSAKEIELEVSEIEREKD 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 71/212 (33%)
Psma8NP_001157081.1 proteasome_alpha_type_7 5..213 CDD:239724 71/212 (33%)

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