DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha1 and PSMB5

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:167 Identity:44/167 - (26%)
Similarity:70/167 - (41%) Gaps:20/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTVALKSGDCAVVATQKKVTE-KNIVPETVTHLFRITKDIGCAMTGRIAD----SRSQVQKAR-Y 96
            ||:|.|.....:||...:.|. ..|..:||..:..|...:...|.|..||    .|...::.| |
Human    61 TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    97 EAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM--VLIAYDNEIGPSVYKTDPAGY 159
            |..|..     .:.|....:.:|  |.||    :.:.:|.||  ::..:|.. ||.:|..|..|.
Human   126 ELRNKE-----RISVAAASKLLA--NMVY----QYKGMGLSMGTMICGWDKR-GPGLYYVDSEGN 178

  Fly   160 FSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLA 196
            .......|||:.::.|...:::.|..:|..|:|..||
Human   179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 44/167 (26%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 44/167 (26%)

Return to query results.
Submit another query.