DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and PSMA4

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002780.1 Gene:PSMA4 / 5685 HGNCID:9533 Length:261 Species:Homo sapiens


Alignment Length:245 Identity:72/245 - (29%)
Similarity:133/245 - (54%) Gaps:8/245 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETV--TH 68
            |..:|...|||||||||||||||.:||.... |.:.:.:.|..::|.:::...| ::.|..  ..
Human     2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAG-TCLGILANDGVLLAAERRNIHK-LLDEVFFSEK 64

  Fly    69 LFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRP 133
            ::::.:|:.|::.|..:|:.....:.|..|..:..:|...:|.:.|...:.||.|.|||....||
Human    65 IYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRP 129

  Fly   134 LGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKP-NLSEEKAIQLAI 197
            .|.|::.|.:|...|..:|::||:|.:.|:||..:|..:..|.|.|::.||. .::.:.|:.|||
Human   130 FGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAI 194

  Fly   198 SCLSSVLAID-FKPNGIEIGVVSKSD--PTFRILDEREIEEHLTKIAEKD 244
            ..|:..:.:. .....:||..:::.:  ...|:|.::|:|:.:.|..|::
Human   195 KVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKHEEEE 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 65/213 (31%)
PSMA4NP_002780.1 proteasome_alpha_type_4 3..216 CDD:239721 65/214 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 1/5 (20%)

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