DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and Prosbeta1

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster


Alignment Length:219 Identity:43/219 - (19%)
Similarity:78/219 - (35%) Gaps:51/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTVALKSGDCAVVATQKKVTEKNIVPETVT-HLFRITKDIGCAMTGRIADSRSQVQKARYE---- 97
            |.:|::.....|:....:.:....|...|| .|.|||..:.|..:|..||:::......|.    
  Fly    17 TIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIADIVAYSLNYH 81

  Fly    98 -------------AANFR-YKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIG 148
                         |:.|| |.|.|.                       ..|...:::..:|.:.|
  Fly    82 ENQTNKDALVFEAASEFRNYCYSYR-----------------------ESLLAGIIVAGWDEQRG 123

  Fly   149 PSVYKTDPAGYFSGFKACSVGAKTLEANSYL----EKKYKPNLSEEKAIQLAISCLSSVLAIDFK 209
            ..||.. |.|.....::|::|.   ..:|::    .:.|:||::.|..:......:...:..|..
  Fly   124 GQVYSI-PLGGMLTRESCTIGG---SGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGS 184

  Fly   210 PNG-IEIGVVSKSDPTFRILDERE 232
            ..| :.||:::|.....||....|
  Fly   185 SGGVVRIGIITKDGIERRIFYNTE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 39/203 (19%)
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 40/212 (19%)

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